prot_Ecto-sp9_F_contig1119.1019.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1119.1019.1
Unique Nameprot_Ecto-sp9_F_contig1119.1019.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length65
Homology
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK3_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.970e-31
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    1 LRKLLRNQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELDMQ 65
            LRKLLRNQNRLIDSIRQMDTDRDGV+STAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELDMQ
Sbjct:  734 LRKLLRNQNRLIDSIRQMDTDRDGVVSTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELDMQ 798          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: EF-hand (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN6_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 9.280e-31
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 0
Query:    1 LRKLLRNQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELDMQ 65
            LRKLLRNQNRLIDSIRQMDTDRDGV+STAEFRAAIVSMNLGLTDRQVE LIHSIDVDNDGELDMQ
Sbjct:  691 LRKLLRNQNRLIDSIRQMDTDRDGVVSTAEFRAAIVSMNLGLTDRQVENLIHSIDVDNDGELDMQ 755          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: Ef (hand family protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZVZ5_STYLE)

HSP 1 Score: 57.0 bits (136), Expect = 7.040e-8
Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 LRKLLRNQNRLIDSI-RQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELD 63
            LR+++R+ ++ I  I R+ DTD +G IS  EFR AI  +NLGLT R+++KL+  ID ++DG++D
Sbjct: 1404 LRQIMRSSSQSISEIFREFDTDGNGSISEVEFRNAIRKLNLGLTSREIDKLMLRIDSNSDGKID 1467          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 4.610e-7
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    3 KLLRNQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELDMQ 65
            +LL++Q RL+D I  MD DR+G I   E R  + S+ LGL+D +++ L+ S+D D  G +  +
Sbjct:  583 ELLKHQGRLVDQIHAMDKDRNGCIDVDELRTMVASLELGLSDDEMDFLLKSLDTDGSGTMSFE 645          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: EF (hand family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I929_9SPIT)

HSP 1 Score: 52.8 bits (125), Expect = 2.200e-6
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 LRKLLRNQNRLIDSI-RQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELD 63
            +R++++     ID I ++ D+D +G IS  EFR AI  +NLGLT R+++KL+  ID ++DG++D
Sbjct: 1403 IRQIIKTSASSIDQIFQEFDSDGNGTISEIEFRQAIRKLNLGLTSREIDKLMLRIDSNSDGKID 1466          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: Predicted (protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7SIU0_NEMVE)

HSP 1 Score: 50.1 bits (118), Expect = 1.930e-5
Identity = 25/60 (41.67%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    4 LLRNQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELD 63
            L R   R++D  R++D D+   +S  EF   +   ++GLT  +VEK+I S+DVD+DGE+D
Sbjct:  409 LAREHVRVVDLFRRLDKDQSMQVSVREFVEGLRKSDVGLTAFEVEKIIESLDVDDDGEID 468          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: leucine-rich (repeat-containing protein 74B-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AF405)

HSP 1 Score: 49.3 bits (116), Expect = 3.580e-5
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    7 NQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELD 63
            N+ RL+D   Q D D  G IS  EF+  +    L +T RQ+++LI  ID++NDGE++
Sbjct:  333 NRLRLVDWFNQFDKDHSGGISRDEFKTGLRETGLVMTQRQLDRLIDFIDINNDGEIE 389          
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Match: leucine-rich (repeat-containing protein 74A-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3DDC9)

HSP 1 Score: 49.3 bits (116), Expect = 3.640e-5
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    7 NQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKLIHSIDVDNDGELD 63
            N+ RL+D   Q D D  G IS  EF+  +    L +T RQ+++LI  ID++NDGE++
Sbjct:  601 NRLRLVDWFNQFDKDHSGGISRDEFKTGLRETGLVMTQRQLDRLIDFIDINNDGEIE 657          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1119.1019.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
EF-hand1.970e-3198.46domain-containing protein n=1 Tax=Ectocarpus silic... [more]
EF-hand9.280e-3196.92domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Ef7.040e-846.88hand family protein n=1 Tax=Stylonychia lemnae Tax... [more]
Uncharacterized4.610e-739.68protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
EF2.200e-642.19hand family protein n=1 Tax=Oxytricha trifallax Ta... [more]
Predicted1.930e-541.67protein n=3 Tax=Nematostella vectensis TaxID=45351... [more]
leucine-rich3.580e-542.11repeat-containing protein 74B-like n=1 Tax=Acropor... [more]
leucine-rich3.640e-542.11repeat-containing protein 74A-like isoform X1 n=3 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..65
e-value: 4.5E-15
score: 57.7
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 51..65
e-value: 0.12
score: 11.9
coord: 12..33
e-value: 4.3E-6
score: 26.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 6..41
score: 11.696
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 42..65
score: 9.409
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1119contigEcto-sp9_F_contig1119:843..1037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1119.1019.1mRNA_Ecto-sp9_F_contig1119.1019.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1119 843..1037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1119.1019.1 ID=prot_Ecto-sp9_F_contig1119.1019.1|Name=mRNA_Ecto-sp9_F_contig1119.1019.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=65bp
LRKLLRNQNRLIDSIRQMDTDRDGVISTAEFRAAIVSMNLGLTDRQVEKL
IHSIDVDNDGELDMQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair