prot_Ecto-sp9_F_contig1113.979.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1113.979.1
Unique Nameprot_Ecto-sp9_F_contig1113.979.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length376
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1113.979.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC1_ECTSI)

HSP 1 Score: 574 bits (1479), Expect = 6.170e-205
Identity = 303/316 (95.89%), Postives = 307/316 (97.15%), Query Frame = 0 
Query:   60 MPGTVMAMLAAFRPCTTQKALLSMLTLSAALSIAWAVLAYEAWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRGAPTLTWKITRGVQRVSSTVVFAAAALATVLQAVLVTLDYKYLNLWTAYLEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVSRVVAMTGSVAVCLVLRAVVLVWVAGKPIFVNTDLEMLALLGYWVLLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGVATGTRFDGSNTFAGSCIPTVHS 375
            MPGTVMAMLAAFRP TTQKALLSMLTLSAALSIAW+VLAYEAWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRG PTL WKITRGVQRVSSTVVFAAAALATV QAVLVTLD  YLNLWTAY+EGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRV RVVAMTGSVAVCLVLRAVVLVW AGKPIFVNTDLEMLALLGYWVLLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPG+ATGTRFDGSNTFAGS +PTVHS
Sbjct:    1 MPGTVMAMLAAFRPFTTQKALLSMLTLSAALSIAWSVLAYEAWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSARQGAGASRPLGGGDEYRPRGTPTLIWKITRGVQRVSSTVVFAAAALATVFQAVLVTLDSMYLNLWTAYVEGGVFILAAFVMVTAAYYAVVELRLVPIELPTRRRRVFRVVAMTGSVAVCLVLRAVVLVWAAGKPIFVNTDLEMLALLGYWVLLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIPPGIATGTRFDGSNTFAGSRLPTVHS 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1113.979.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized6.170e-20595.89protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 315..375
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..239
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..314
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 140..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 240..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..216
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 259..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1113contigEcto-sp9_F_contig1113:1204..4228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1113.979.1mRNA_Ecto-sp9_F_contig1113.979.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1113 210..5355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1113.979.1 ID=prot_Ecto-sp9_F_contig1113.979.1|Name=mRNA_Ecto-sp9_F_contig1113.979.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=376bp
MSSVQFRLFVVCGLVGLVNIVLFCACGIALARVLRAAARDAYSSPRRRLL
ALDDGAARRMPGTVMAMLAAFRPCTTQKALLSMLTLSAALSIAWAVLAYE
AWDLLHGTLDVSVSVALRVAFYGTDFFLAATTFTLYTILAKFWADLAFSA
RQGAGASRPLGGGDEYRPRGAPTLTWKITRGVQRVSSTVVFAAAALATVL
QAVLVTLDYKYLNLWTAYLEGGVFILAAFVMVTAAYYAVVELRLVPIELP
TRRRRVSRVVAMTGSVAVCLVLRAVVLVWVAGKPIFVNTDLEMLALLGYW
VLLVALPSSIVLAYNRVVPLSSYSGGRGGTGNVSLRWTAPDEEEEEPLIP
PGVATGTRFDGSNTFAGSCIPTVHS*
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