prot_Ecto-sp9_F_contig11113.965.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11113.965.1
Unique Nameprot_Ecto-sp9_F_contig11113.965.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length121
Homology
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: USP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 5.710e-73
Identity = 115/119 (96.64%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK 119
            +QEDAHEFLRHLLDKMVDCYLKR+GVKSSAP+RLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSI+VALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK
Sbjct:  368 RQEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK 486          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.690e-51
Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDL----SRGV----RSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK 119
            +QEDAHEFLRHL+DKM   YL+RRGV   APNRLAETTPI+R+FGGYLRS+LKC++CG CSDTFDPFMDL+M++    S GV    RS+  ALRRF A E LG+GNEW+CGGC K V+AEK+LSVFK
Sbjct:  237 RQEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFK 363          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 2.500e-49
Identity = 86/126 (68.25%), Postives = 101/126 (80.16%), Query Frame = 0
Query:    2 QEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDL----SRGV----RSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK 119
            QEDAHE LRHL+DKM   YL+RRGV   A NRL ETTPI+R+FGGYLRS+L+C+KCG CSDTFDPFMDL+M++    SRGV    RS+  ALRRF A E LG+GNEW+CGGC K V+AEK+LSVFK
Sbjct:  299 QEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSKCGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFK 424          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: USP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.630e-42
Identity = 66/117 (56.41%), Postives = 92/117 (78.63%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSV 117
            +QEDAHEFLR L+D M +  L+R GVK++AP+RL ETT INR+FGGYLR++++CTKC +CS+T++ +MDLS+D+   + S++ AL+RF A E L S N WRCGGCK+ V A K L++
Sbjct:   98 RQEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTI 214          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 138 bits (348), Expect = 3.380e-36
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLS 116
            +QEDAHEFLRHLLD +    L+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+++   V  ++ AL RF A E L   N WRC  C + V A+K LS
Sbjct:  251 RQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLS 366          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.460e-35
Identity = 65/116 (56.03%), Postives = 85/116 (73.28%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLS 116
            +QEDAHEFLRHLLD +    L+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+++   V  ++ AL RF A E L   N WRC  C + V A+K LS
Sbjct:  251 RQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLS 366          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Ubiquitin (carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.720e-35
Identity = 64/116 (55.17%), Postives = 86/116 (74.14%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLS 116
            +QEDAHEFLRHLLD + +  L+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+++   V  ++ AL RF A E L   N W+C  C + V A+K LS
Sbjct:  251 RQEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWKCPACSQLVCAQKRLS 366          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUI1_HETAK)

HSP 1 Score: 127 bits (319), Expect = 4.880e-35
Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSA--PN--RLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVF 118
            +QEDA EFL HLLD MV   L+R  VK +A  PN  R++ETT I+RIFGGYLR+++KC +CG+CS+TF+  MDLS++L+ G +S+  A   F   E+L S N WRC  C+K V A K L+++
Sbjct:   16 RQEDAQEFLCHLLDAMVKTELRRARVKENATGPNGERISETTAIHRIFGGYLRNQVKCPECGYCSETFNQTMDLSLELTGGTQSLQQAYSHFSRREKLDSANRWRCDECRKQVCATKQLTLY 137          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFU1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.160e-34
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKV 120
            +QEDAHEFLRHLLD +    L R G+K +   R  ET+ I RIFGGYLRS+LKC+ C  C  T+D F+DLS++++  + S+  AL+ F A E L   N W+CGGC K V+A K +++FK 
Sbjct:  130 RQEDAHEFLRHLLDGLHRACLVREGLKPTDCGRREETSAIYRIFGGYLRSQLKCSNCAFCLHTYDAFLDLSLEITGKISSLPSALQMFQAAEVLDKHNRWKCGGCGKHVRARKQITIFKA 249          
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Match: USP (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJQ6_9ARCH)

HSP 1 Score: 125 bits (315), Expect = 5.100e-34
Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    2 QEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKV 120
            QED+HEFLR LL+KM    L+  GVK  AP RL ETT I+++FGGY  ++L C  C + S+ F+PF+DL +++  G+ S+D ALR F   E L + N W+C  C+KPV A+K +++ KV
Sbjct:    3 QEDSHEFLRCLLEKMHRASLRVAGVKEGAPGRLDETTIIHKLFGGYFCNQLHCPNCKYDSNNFEPFLDLCLEVGNGINSVDRALRHFATVETLDADNRWKCPRCEKPVCAKKQMTIRKV 121          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11113.965.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
USP5.710e-7396.64domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Ubiquitin1.690e-5169.29carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sil... [more]
Ubiquitin2.500e-4968.25carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp.... [more]
USP1.630e-4256.41domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Ubiquitin3.380e-3656.03carboxyl-terminal hydrolase n=1 Tax=Nannochloropsi... [more]
Ubiquitin1.460e-3556.03carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloro... [more]
Ubiquitin2.720e-3555.17carboxyl-terminal hydrolase n=1 Tax=Nannochloropsi... [more]
Hypothetical4.880e-3551.64protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical2.160e-3450.00protein (Fragment) n=2 Tax=Pinguiococcus pyrenoido... [more]
USP5.100e-3447.90domain-containing protein n=1 Tax=archaeon TaxID=1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1..120
e-value: 5.1E-31
score: 109.8
NoneNo IPR availablePANTHERPTHR24006:SF685UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15coord: 2..118
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 2..118
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..120
score: 17.3
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11113contigEcto-sp9_F_contig11113:2554..3855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11113.965.1mRNA_Ecto-sp9_F_contig11113.965.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11113 2554..3855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11113.965.1 ID=prot_Ecto-sp9_F_contig11113.965.1|Name=mRNA_Ecto-sp9_F_contig11113.965.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=121bp
KQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTPINRIFGGYLRS
RLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEW
RCGGCKKPVQAEKSLSVFKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf