prot_Ecto-sp9_F_contig11059.930.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11059.930.1
Unique Nameprot_Ecto-sp9_F_contig11059.930.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length134
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11059.930.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI18_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.280e-56
Identity = 132/136 (97.06%), Postives = 132/136 (97.06%), Query Frame = 0 
Query:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGFDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGXXXXXXXXXXXXXXXXXXXXXXXX--VHVDGCHVAMAXXXXXXXAVGG 134
            MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVG DNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGXXXXXXXXXXXXXXXXXXXXXXXX  VHVDGCHVAMAXXXXXXX VGG
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGXXXXXXXXXXXXXXXXXXXXXXXXXXVHVDGCHVAMAXXXXXXXXVGG 136
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11059.930.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.150e-50
Identity = 97/123 (78.86%), Postives = 97/123 (78.86%), Query Frame = 0 
Query:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGFDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGXXXXXXXXXXXXXXXXXXXXXXXXVHVDGCHVAMA 123
            MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAV VG DNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKG                        VHVDGCHVAMA
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVGVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGGAGAGGRRYHRTGGDGGSAVV---VHVDGCHVAMA 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11059.930.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.280e-5697.06protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.150e-5078.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11059contigEcto-sp9_F_contig11059:1371..3010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11059.930.1mRNA_Ecto-sp9_F_contig11059.930.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11059 1371..3268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11059.930.1 ID=prot_Ecto-sp9_F_contig11059.930.1|Name=mRNA_Ecto-sp9_F_contig11059.930.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=134bp
MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGFDNLG
SLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKGGGGGGGGGGRRY
HRTGGDGGSAVVVHVDGCHVAMAAAAAAAAAVGG
back to top