prot_Ecto-sp9_F_contig11050.924.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE) HSP 1 Score: 161 bits (408), Expect = 8.800e-45 Identity = 108/111 (97.30%), Postives = 108/111 (97.30%), Query Frame = 0
Query: 1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSGAXXXXXXXXXXXXXXXPTNAELLKQSQSYALLS 111
MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASG XXXXXXXXXXXXXXXPTNAELLKQSQSYALLS
Sbjct: 71 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGGXXXXXXXXXXXXXXXXXPTNAELLKQSQSYALLS 181
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI) HSP 1 Score: 135 bits (339), Expect = 8.180e-34 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query: 1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASG 76
MGDRELLQWVSDKLHDVVGFSESSTAQFV+ALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELM RVGASG
Sbjct: 1 MGDRELLQWVSDKLHDVVGFSESSTAQFVLALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMTRVGASG 76
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.160e-15 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0
Query: 1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSGAXXXXXXXXXXXXXXXPTNAELLKQSQSYALL 110
M DRE+ +WVSDKLHD++G+S+++TAQF+ ALA+RA+ A AL+ L+D DVP N ++R+FA EL+ +VG + + PT AELL S+SY LL
Sbjct: 1 MSDREVNRWVSDKLHDILGYSDNTTAQFITALAKRATS----ADALVEQLADNDVPVNDSTRSFARELLMKVGGAAA-------RPAQPAAPRGPTQAELLAASKSYGLL 99
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I880_MICPS) HSP 1 Score: 65.9 bits (159), Expect = 1.260e-9 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query: 1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSG 78
M +R L WVSDKLHD++GF+E + A +V+AL ++AS +G L + L+ +P + T+R+FAAELM+RV +G G
Sbjct: 1 MDERALKSWVSDKLHDILGFAEGALASYVIALGKKASDAGS----LASQLASQGLPDDGTTRSFAAELMSRVPRAGGG 74
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYA0_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 5.080e-8 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV-GASGSG 78
DREL WVSD+LHDV GFS+ +TA F++A AR+A G AAL LS +P AFAAEL++R+ +SG+G
Sbjct: 4 DRELRAWVSDRLHDVAGFSDRTTADFILATARKAKA---GPAALARALSAAGLPDTPPVAAFAAELLSRLPSSSGAG 77
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Pre-mRNA-splicing (factor ATP-dependent RNA helicase-like protein cdc28 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KYR4_9CHLO) HSP 1 Score: 55.1 bits (131), Expect = 6.040e-6 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0
Query: 3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAA-ALLAGLSDLDVPANATSRAFAAELMARVGAS 75
DREL WVSD+LH++VGFS+ +TA F++A A++ KG+A AL LS +P NA AF EL++R+ +S
Sbjct: 4 DRELRSWVSDRLHELVGFSDRTTADFILAQAKKV----KGSAPALGRHLSAAGLPDNAAVAAFCGELLSRLPSS 73
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: ATP-dependent (RNA helicase DHX8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1Z9_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.280e-5 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 8 QWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGAS 75
QW SDKLH++VGFSESS +V+AL KS K + +++ L + D P + +R FA E+M+RV +S
Sbjct: 10 QWTSDKLHELVGFSESSAVDYVIALG----KSAKSESDVVSRLHEYDFPRDERTRQFAREVMSRVKSS 73
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V8T8_TETOB) HSP 1 Score: 53.9 bits (128), Expect = 1.740e-5 Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV 72
D+EL WVSD+LH +VGFS+ + A FV+A A++A K ++LL L+ VPA ++ +AFA ++AR+
Sbjct: 4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLAAFGVPAGSSGQAFAEGVLARL 69
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Putative (ATP-dependent RNA helicase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QBU1_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 5.750e-5 Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV 72
D+EL WVSD+LH +VGFS+ + A FV+A A++A K ++LL L VPA+++ + FA ++AR+
Sbjct: 4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLEAFGVPASSSGQVFAEGVLARL 69 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 9
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig11050.924.1 ID=prot_Ecto-sp9_F_contig11050.924.1|Name=mRNA_Ecto-sp9_F_contig11050.924.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=153bpback to top |