prot_Ecto-sp9_F_contig11050.924.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11050.924.1
Unique Nameprot_Ecto-sp9_F_contig11050.924.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 8.800e-45
Identity = 108/111 (97.30%), Postives = 108/111 (97.30%), Query Frame = 0
Query:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSGAXXXXXXXXXXXXXXXPTNAELLKQSQSYALLS 111
            MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASG   XXXXXXXXXXXXXXXPTNAELLKQSQSYALLS
Sbjct:   71 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGGXXXXXXXXXXXXXXXXXPTNAELLKQSQSYALLS 181          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.180e-34
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASG 76
            MGDRELLQWVSDKLHDVVGFSESSTAQFV+ALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELM RVGASG
Sbjct:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVLALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMTRVGASG 76          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.160e-15
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSGAXXXXXXXXXXXXXXXPTNAELLKQSQSYALL 110
            M DRE+ +WVSDKLHD++G+S+++TAQF+ ALA+RA+     A AL+  L+D DVP N ++R+FA EL+ +VG + +                 PT AELL  S+SY LL
Sbjct:    1 MSDREVNRWVSDKLHDILGYSDNTTAQFITALAKRATS----ADALVEQLADNDVPVNDSTRSFARELLMKVGGAAA-------RPAQPAAPRGPTQAELLAASKSYGLL 99          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I880_MICPS)

HSP 1 Score: 65.9 bits (159), Expect = 1.260e-9
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGASGSG 78
            M +R L  WVSDKLHD++GF+E + A +V+AL ++AS +G     L + L+   +P + T+R+FAAELM+RV  +G G
Sbjct:    1 MDERALKSWVSDKLHDILGFAEGALASYVIALGKKASDAGS----LASQLASQGLPDDGTTRSFAAELMSRVPRAGGG 74          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYA0_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 5.080e-8
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV-GASGSG 78
            DREL  WVSD+LHDV GFS+ +TA F++A AR+A     G AAL   LS   +P      AFAAEL++R+  +SG+G
Sbjct:    4 DRELRAWVSDRLHDVAGFSDRTTADFILATARKAKA---GPAALARALSAAGLPDTPPVAAFAAELLSRLPSSSGAG 77          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Pre-mRNA-splicing (factor ATP-dependent RNA helicase-like protein cdc28 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KYR4_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 6.040e-6
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAA-ALLAGLSDLDVPANATSRAFAAELMARVGAS 75
            DREL  WVSD+LH++VGFS+ +TA F++A A++     KG+A AL   LS   +P NA   AF  EL++R+ +S
Sbjct:    4 DRELRSWVSDRLHELVGFSDRTTADFILAQAKKV----KGSAPALGRHLSAAGLPDNAAVAAFCGELLSRLPSS 73          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: ATP-dependent (RNA helicase DHX8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1Z9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.280e-5
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    8 QWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARVGAS 75
            QW SDKLH++VGFSESS   +V+AL     KS K  + +++ L + D P +  +R FA E+M+RV +S
Sbjct:   10 QWTSDKLHELVGFSESSAVDYVIALG----KSAKSESDVVSRLHEYDFPRDERTRQFAREVMSRVKSS 73          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: RNA (helicase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V8T8_TETOB)

HSP 1 Score: 53.9 bits (128), Expect = 1.740e-5
Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV 72
            D+EL  WVSD+LH +VGFS+ + A FV+A A++A    K  ++LL  L+   VPA ++ +AFA  ++AR+
Sbjct:    4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLAAFGVPAGSSGQAFAEGVLARL 69          
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Match: Putative (ATP-dependent RNA helicase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QBU1_9CHLO)

HSP 1 Score: 52.4 bits (124), Expect = 5.750e-5
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    3 DRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMARV 72
            D+EL  WVSD+LH +VGFS+ + A FV+A A++A    K  ++LL  L    VPA+++ + FA  ++AR+
Sbjct:    4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLEAFGVPASSSGQVFAEGVLARL 69          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11050.924.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Uncharacterized8.800e-4597.30protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.180e-3497.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
P-loop2.160e-1545.45containing nucleoside triphosphate hydrolase prote... [more]
RNA1.260e-946.15helicase n=1 Tax=Micromonas pusilla TaxID=38833 Re... [more]
RNA5.080e-850.65helicase n=1 Tax=Raphidocelis subcapitata TaxID=30... [more]
Pre-mRNA-splicing6.040e-647.30factor ATP-dependent RNA helicase-like protein cdc... [more]
ATP-dependent1.280e-545.59RNA helicase DHX8 n=1 Tax=Hondaea fermentalgiana T... [more]
RNA1.740e-544.29helicase n=1 Tax=Tetradesmus obliquus TaxID=3088 R... [more]
Putative5.750e-542.86ATP-dependent RNA helicase n=1 Tax=Scenedesmus sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR18934:SF214coord: 6..141
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 6..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11050contigEcto-sp9_F_contig11050:19..2048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11050.924.1mRNA_Ecto-sp9_F_contig11050.924.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11050 2..2048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11050.924.1 ID=prot_Ecto-sp9_F_contig11050.924.1|Name=mRNA_Ecto-sp9_F_contig11050.924.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=153bp
MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGL
SDLDVPANATSRAFAAELMARVGASGSGAGGGGRALQRQQQQRQPTNAEL
LKQSQSYALLSSDEEDGGGGYSSLKAKEDRRAEKKALRKREKKAAAAAAE
ASS
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