prot_Ecto-sp9_F_contig11049.918.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11049.918.1
Unique Nameprot_Ecto-sp9_F_contig11049.918.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length361
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11049.918.1 vs.
Match: Myb-like (DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 1.430e-101
Identity = 320/365 (87.67%), Postives = 323/365 (88.49%), Query Frame = 0 
Query:    1 RRKRNCSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQMSQPLGESLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQSDLTRSARRSSXXXXXXXXXKG---TRGPANHGLFPPLNSQARIIFDLVENVVPGSSSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RQKGKPKAKGHVGGQRPAVQAPVSKPRGTKGGGPGSFCSK 361
            +RKRN SQLATFGDENGAPSPFPSDGG KNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQM+QPLGESLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQSDLTRSARRSS XXXXXXXX     T GPANHGLFPPLNSQ     DLVENVVP SSSGAG                          WGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQKGKPKAKGHVGGQRPAVQAPVSKP+GTKGGGPGSFCSK
Sbjct:  193 KRKRNYSQLATFGDENGAPSPFPSDGGPKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQMNQPLGESLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQSDLTRSARRSSGXXXXXXXXXXXXXTPGPANHGLFPPLNSQ-----DLVENVVPASSSGAGAASQAGAGPSFSSVTSPRSARGG---WGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKGKPKAKGHVGGQRPAVQAPVSKPQGTKGGGPGSFCSK 549
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11049.918.1 vs.
Match: MYB (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 4.650e-79
Identity = 283/367 (77.11%), Postives = 288/367 (78.47%), Query Frame = 0 
Query:    1 RRKRNCSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQMSQPLGESLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQSDLTRSARRSSXXXXXXXXXKGTRGPANHGLFPPLNSQARIIFDLVENVVPGSSSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------QKGKPKAKGHVGGQRPAVQAPVSKPRGTKGGGPGSFCSK 361
            +RKRN SQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDP ++QPLG+SLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQ                                           DLVENVVPGSSSGAG                          WGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       QKGKPKAKG VGGQRPAVQAPVSKP+GTKGGGPGSFCSK
Sbjct:  223 KRKRNYSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPHINQPLGDSLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGSQ-------------------------------------------DLVENVVPGSSSGAGASSQAGAGPSFSSATSPRSARGGGGRWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKGKPKAKGQVGGQRPAVQAPVSKPQGTKGGGPGSFCSK 546
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11049.918.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Myb-like1.430e-10187.67DNA-binding domain containing protein n=1 Tax=Ecto... [more]
MYB4.650e-7977.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11049contigEcto-sp9_F_contig11049:795..3779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11049.918.1mRNA_Ecto-sp9_F_contig11049.918.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11049 795..3779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11049.918.1 ID=prot_Ecto-sp9_F_contig11049.918.1|Name=mRNA_Ecto-sp9_F_contig11049.918.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=361bp
RRKRNCSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQ
VTFDDTHRFAMEEDPQMSQPLGESLMNDPFLATPEPTTGSRKDIDQALSL
LQLSGGSGSQSDLTRSARRSSGGGGDGGGGKGTRGPANHGLFPPLNSQAR
IIFDLVENVVPGSSSGAGAASQAGAGPSSSSATSPRSARGGGGGWGAKSP
AGVHGHMLHHPSCSSGGGGGAGPLSSPLMSSSAVSSSVLSPPPPSPFSRA
AAAASASYHNPAAAAAAAAIRILPPPPPEVGGVGNNKKKAAGGAGRGGGV
SQGGGGKSKGGGSAAAASGGGRQKGKPKAKGHVGGQRPAVQAPVSKPRGT
KGGGPGSFCSK
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