prot_Ecto-sp9_F_contig11011.898.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11011.898.1
Unique Nameprot_Ecto-sp9_F_contig11011.898.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length404
Homology
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: ATG13 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI)

HSP 1 Score: 773 bits (1997), Expect = 2.260e-277
Identity = 386/403 (95.78%), Postives = 391/403 (97.02%), Query Frame = 0
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLGFSASGGEDHAGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTSTHTAAPDMTTSLIPDYVTDEYERNAAASRMPAAEVNHDWPKLPSTPEDGASGPDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKQTHIGPRQGPAPFLTPGPHRGRPLG-HDVMMEPLELGPNAEIHARGPPLLPAPPVRQENEDLIRVSAQTLSGASGRTESNHVDSRCSNGV 402
            MSSDRSKCEQVVYELLCKVAELVVSSRVSL+QPQRR+VNSKFSLHVQELA VRNSMKAWENNLTLPLGIDIFWVEGGGD APRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGL FSASGGEDHAG SGRKSTSCY FKPLKAPHGSVKVICHYRRGVDSKAYQHGQT+T TAAPDMTTSLIPDYVTDEYERNAAASRMPA EVNHDWPKLPSTPEDGAS PDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEK+THIGPRQGPAPFLTPGPHRGRPLG HDVMMEPLELGPNAEIHARGPP  PAPPVRQENEDLIRVSAQTLSGASGRTESNHVDS CSNG+
Sbjct:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLIQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGIDIFWVEGGGDGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHAGRSGRKSTSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPATEVNHDWPKLPSTPEDGASVPDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLGRHDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLIRVSAQTLSGASGRTESNHVDSHCSNGM 403          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW66_GLOUD)

HSP 1 Score: 89.0 bits (219), Expect = 1.830e-15
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 0
Query:    5 RSKCEQVVYELLCKVAELVVSSRVSL---VQPQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQDAAEGKS--------------------AQLRHFFKRSIILLRTLYSLVRLLPAYSVHKR 136
            R+K +QVV E L K AEL++ SRV+       +R +  ++F+L ++E+  VR++M AW  ++ LPL I I+   GG D   +R LLE+W +MY A D  +  S                     QL+   K+  +LLR LYS +RLLPA+ + KR
Sbjct:    1 RAKTDQVVLEFLYKAAELIIQSRVNFQSEADHRRGNRRARFNLDIEEVQFVRDAMLAWREDVHLPLTIGIYLDSGGDD---QRVLLEQWSVMY-APDGGDADSYSGLRRNSSSHLTGAARDVIQQLKEVCKKISVLLRALYSFMRLLPAHRLFKR 151          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNL2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.760e-15
Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 0
Query:    2 SSDRSKCEQVVYELLCKVAELVVSSRV-SLVQPQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDA------APRRELLERWEIMYEAQDAA------EGKSAQLRHFFKRSIILLRTLYSLVRLLPA 130
            +S  SKCEQV++E + K AE+V+ +R+ S  Q  RR    +F++ V E+ +VR  M+ W  +L LPL I I W E             +  LLERW+I +E   A+      E    Q+R  +KR +ILLRTLYS + LLPA
Sbjct:    4 NSAASKCEQVMFEAVAKAAEIVLLNRIHSPSQLGRRLGRQRFNMDVDEVDVVRGMMEYWRRDLHLPLRILIVWRENNSTEKKNILQGTKPRLLERWDIQFELASASLSGPNEEELLVQVRSVWKRVVILLRTLYSRMLLLPA 145          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: ATG13 (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV64_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.190e-12
Identity = 71/243 (29.22%), Postives = 115/243 (47.33%), Query Frame = 0
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQDAAEGKSA---QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLGFSASGGED---HAGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVDS--KAYQHGQTSTHTAAPDMTTSL 235
            +S+ + K +QVV E L K  E+V+ SR        R   ++F+L +QEL  VR++M+ +++N+T P+ +DIF             LLERW I Y +   A+       QLR   +R  ILLR +Y L R+LPA+ V  R++++       ++D G  L  L+            A G  D          +    Y+F P+  P G++++   YR+  D    A +    + H  A   TT++
Sbjct:   40 VSTGKKKTDQVVLEFLYKTVEVVLLSRAYFQPSTPR--RARFNLDIQELVHVRDAMRMYKDNVTQPVLVDIFM---------GATLLERWHISYTSGMQAQSPVDVINQLREVCRRIGILLRAVYCLARILPAFPVGDRLKTQ-------QEDLGHPLVGLQ-----------YAIGSVDTDMQVQFDAAEPKQRYSFVPIDTPFGTLQLSVLYRKRNDDLLAAIEQMAVADHPTAAATTTTI 253          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Aste57867_23525 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LN19_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.160e-12
Identity = 66/218 (30.28%), Postives = 105/218 (48.17%), Query Frame = 0
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQDAAEGKSA-----QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLGFSASGGEDHAGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVD 213
            +S+ + K +QVV E L K  E+V+ SR        R   ++F+L +QEL  VR S++ + +N+  PL +DIF             LLERW I Y +    + KS      QLR   +R  ILLRT+Y LVR+LPA+ V  R++++       ++D G  +  L+            A   +        +    Y+F P++ P G +++   YR+  D
Sbjct:   38 LSTGQKKTDQVVLEFLYKTVEVVLLSRAYFQPTTPR--RARFNLDIQELTHVRESLRPYRDNVGQPLFLDIFMGS---------TLLERWHISYTS--GMQSKSPVDVINQLREVCRRIGILLRTVYCLVRILPAFPVGTRLKTQ-------QEDLGHVVAGLQ--------YAVGAVDADMRQQFDAAEPKQRYSFVPIETPFGMIQLSVLYRKRND 227          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Uncharacterized (protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NID3_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 3.470e-12
Identity = 42/140 (30.00%), Postives = 81/140 (57.86%), Query Frame = 0
Query:    5 RSKCEQVVYELLCKVAELVVSSRVSLVQPQRRD------VNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAA---PRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHK 135
            R+K EQ+V EL  K+ ++++ SR+ +VQ   ++      +N  F+L ++E+  +   +  W  N+ +PL I +F+    G A      R +LE+W+I  E     + ++ ++   +KR ++L+R+LYS +R++P YSV +
Sbjct:   13 RTKTEQIVRELYVKLTQVILQSRIPMVQQAAKNGTGKVKINKWFNLELEEVENITQELTPWRQNMYIPLCIKVFFNSSRGMAQHPYEERVMLEKWKIQLEPH-TGQRENVEVPVLYKRLVLLVRSLYSYLRVVPTYSVFR 151          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z1_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.670e-12
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0
Query:   56 MKAWENNLTLPLGIDIFWVEGGG-DAAPRRELLERWEI 92
            MKAWE +LTLPLGIDIFWVEGGG D AP RELLERWEI
Sbjct:    1 MKAWEKDLTLPLGIDIFWVEGGGGDGAPGRELLERWEI 38          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: autophagy-related (protein 13a-like isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB13415)

HSP 1 Score: 77.0 bits (188), Expect = 1.460e-11
Identity = 53/176 (30.11%), Postives = 84/176 (47.73%), Query Frame = 0
Query:    2 SSDRSKCEQVVYELLCKVAELVVSSRVSLVQ----------PQRRDVNSKFSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRE---------------LLERWEIMYEA------QDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLAD 146
            S+D  + EQ+V + L K   +++ SR+  V           P ++  N  F+L + +   V +++  W  NL  P+ IDI  V+   D++ R                 LLERW + YE       Q   E  S+  +  +K+ IILLRTLYS +R+LPAY   +++ S+ V   D
Sbjct:    8 SADHGRFEQIVSQFLIKSLHMILDSRIPSVHHHNGEYFSSIPSKKS-NRWFNLLLGDRPPVLDNLSFWHRNLVQPMIIDIILVQEMTDSSSRSNHTLSAAFESGKSVETLLERWTVQYEYSKSMFHQFGVESSSSSYKKMYKKLIILLRTLYSTMRMLPAYRPFRKLSSKSVETCD 182          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: Uncharacterized (protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RDE6_KALFE)

HSP 1 Score: 75.1 bits (183), Expect = 6.550e-11
Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 0
Query:    2 SSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVN----SK-------FSLHVQELALVRNSMKAWENNLTLPLGIDIFWVE---GGGDAAPRRELLERWEIMYEAQDAA-------EGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQS 139
            + D ++ EQ+V + L K   +V+SSR+  +  + RD      SK       F L + E     +++  W  NL  P+ ID+  V    G   A     ++ERW I YE Q  A       E  SA  +  +K++I++LR+LYS +RLLP+Y + +++ S
Sbjct:   11 NQDLARLEQIVSQFLLKSLHIVLSSRIPSIGARERDSQLSGPSKVTKSDKWFGLALGERPAALDNLSFWHRNLADPMVIDVVLVHEDVGSFSADKVETVVERWVIQYECQRMAPLSTRMGESSSAAFKRVYKKTILMLRSLYSTMRLLPSYKLFRKLTS 169          
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Match: ATG13 (domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E0K3_9ASTE)

HSP 1 Score: 74.7 bits (182), Expect = 8.130e-11
Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    4 DRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVNSK-----FSLHVQELALVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQ--DAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQS 139
            +  + EQ+V + L K   +V+ SRV  ++   R    K     F+L + +      ++ +W  NLT P+ IDI  V+    +     ++ERW + YE +    ++G  +  +  +K+ IILLR+LYS+ +LLPAY   K++ S
Sbjct:   10 EHGRFEQIVSQFLSKSLHIVLDSRVPSIRNHGRTGEVKKSDKWFNLVLGDRPSALENLNSWHRNLTEPMNIDIVLVKDKPGSGSSLTVIERWIVQYECRRTSISQGVDSSHKKTYKKLIILLRSLYSMTKLLPAYKAFKKLCS 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11011.898.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATG132.260e-27795.78domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized1.830e-1536.77protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Hypothetical7.760e-1540.14protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
ATG131.190e-1229.22domain-containing protein n=1 Tax=Aphanomyces eute... [more]
Aste57867_235252.160e-1230.28protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized3.470e-1230.00protein n=1 Tax=Planoprotostelium fungivorum TaxID... [more]
Uncharacterized4.670e-1286.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
autophagy-related1.460e-1130.11protein 13a-like isoform X1 n=2 Tax=Impatiens glan... [more]
Uncharacterized6.550e-1131.45protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787... [more]
ATG138.130e-1130.77domain-containing protein n=3 Tax=Cuscuta sect. Cl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 3..216
e-value: 9.9E-29
score: 102.5
IPR018731Autophagy-related protein 13, N-terminalPFAMPF10033ATG13coord: 81..211
e-value: 1.7E-14
score: 54.1
NoneNo IPR availablePANTHERPTHR13430:SF4AUTOPHAGY-RELATED PROTEIN 13coord: 2..325
IPR040182Autophagy-related protein 13PANTHERPTHR13430UNCHARACTERIZEDcoord: 2..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11011contigEcto-sp9_F_contig11011:946..4012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11011.898.1mRNA_Ecto-sp9_F_contig11011.898.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11011 946..4012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11011.898.1 ID=prot_Ecto-sp9_F_contig11011.898.1|Name=mRNA_Ecto-sp9_F_contig11011.898.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=404bp
MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRRDVNSKFSLHVQELA
LVRNSMKAWENNLTLPLGIDIFWVEGGGDAAPRRELLERWEIMYEAQDAA
EGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDD
TGFSLYPLRDGGSCGSGLGFSASGGEDHAGHSGRKSTSCYAFKPLKAPHG
SVKVICHYRRGVDSKAYQHGQTSTHTAAPDMTTSLIPDYVTDEYERNAAA
SRMPAAEVNHDWPKLPSTPEDGASGPDGAVDAYGQHAGNKVSKENTSMMH
WPSPELGHGYAEKQTHIGPRQGPAPFLTPGPHRGRPLGHDVMMEPLELGP
NAEIHARGPPLLPAPPVRQENEDLIRVSAQTLSGASGRTESNHVDSRCSN
GVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf
IPR018731Atg13_N
IPR040182ATG13