prot_Ecto-sp9_F_contig11000.890.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11000.890.1
Unique Nameprot_Ecto-sp9_F_contig11000.890.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length262
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11000.890.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL38_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.640e-19
Identity = 45/59 (76.27%), Postives = 46/59 (77.97%), Query Frame = 0 
Query:  204 FDAEKWKRAAGRQWGXXXXXXXXXXXXWRRDGDGNPFKGALGSYDALLEEHYLKMSFGQ 262
            FDAEKWKRAAG+QW             WRRDGDGNPFKGALGSYDALLEEHYLKMSFGQ
Sbjct:  179 FDAEKWKRAAGQQWEKVTGRVDGFIDGWRRDGDGNPFKGALGSYDALLEEHYLKMSFGQ 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11000.890.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized2.640e-1976.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11000contigEcto-sp9_F_contig11000:3103..3888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11000.890.1mRNA_Ecto-sp9_F_contig11000.890.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11000 3103..3888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11000.890.1 ID=prot_Ecto-sp9_F_contig11000.890.1|Name=mRNA_Ecto-sp9_F_contig11000.890.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=262bp
AVVRRWLRCVCEHEASGLVEHTHHNLYPSTGSFVEAEMRTCRGLLLVFLA
GPYLACLADEGASIPPAAAAAAAAAADAAEDEVFSKLAEAEQAANAAAAA
AQRAAASLEDMETRAQEENEGSEERVDSNDHADGGGAAAEDNNAALEAAA
AAAAAAAADAAAAADAAAAAAEEIGDEDDDSVDSAAAAAERALGDEDGGG
REGFDAEKWKRAAGRQWGRVTGRVDGFIDGWRRDGDGNPFKGALGSYDAL
LEEHYLKMSFGQ
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