prot_Ecto-sp9_F_contig11000.888.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11000.888.1
Unique Nameprot_Ecto-sp9_F_contig11000.888.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length232
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11000.888.1 vs.
Match: RanBD1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF2_ECTSI)

HSP 1 Score: 345 bits (885), Expect = 1.370e-112
Identity = 211/232 (90.95%), Postives = 212/232 (91.38%), Query Frame = 0 
Query:    1 NHKPKNLPFTVVQRKLASAMKSFLATERQAPAARRAVVTASLSVFRHSCAVTVPAKLSGMAAHALLRALASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGATGGSLVLGTEGFPESQVAAFLLDVTRVEPPPPXTPPVAVPADVALKIISAFGVGKAGGKGESHSLQWGDPSVADSLRGSVRRVANRLQREGKWGLVSELVEHMETRGGVEECEGVLGMKLGEV 232
            NHKPKNLPFTVVQRKLASAMK FLATER APAARRAVVTASLSVFRHSCAVTVPAKLSGMAAHALLRAL S T   XXXXXXXXXXXXXXXXXXX          STGATGGSLVLGTEGFPESQVAAFLLDVTRVEPPPPXTPPVAVPADVALKIISAFGVGKAG KGE HSL+WG PSVADSLRGSVRRVANRLQREGKWGLVSELVEHMETRGGVEECEGVLGMKLGEV
Sbjct:   61 NHKPKNLPFTVVQRKLASAMKLFLATERLAPAARRAVVTASLSVFRHSCAVTVPAKLSGMAAHALLRALVSVTTGTXXXXXXXXXXXXXXXXXXXHRHRSRSP--STGATGGSLVLGTEGFPESQVAAFLLDVTRVEPPPPXTPPVAVPADVALKIISAFGVGKAGRKGEGHSLEWGGPSVADSLRGSVRRVANRLQREGKWGLVSELVEHMETRGGVEECEGVLGMKLGEV 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11000.888.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
RanBD11.370e-11290.95domain-containing protein n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11000contigEcto-sp9_F_contig11000:268..1984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11000.888.1mRNA_Ecto-sp9_F_contig11000.888.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11000 268..1984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11000.888.1 ID=prot_Ecto-sp9_F_contig11000.888.1|Name=mRNA_Ecto-sp9_F_contig11000.888.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=232bp
NHKPKNLPFTVVQRKLASAMKSFLATERQAPAARRAVVTASLSVFRHSCA
VTVPAKLSGMAAHALLRALASATTATTTNGSAGAAGGSKKHHNNNHRHRS
RSPPPSTGATGGSLVLGTEGFPESQVAAFLLDVTRVEPPPPPTPPVAVPA
DVALKIISAFGVGKAGGKGESHSLQWGDPSVADSLRGSVRRVANRLQREG
KWGLVSELVEHMETRGGVEECEGVLGMKLGEV
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