prot_Ecto-sp9_F_contig10998.863.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10998.863.1
Unique Nameprot_Ecto-sp9_F_contig10998.863.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10998.863.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU0_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 1.090e-60
Identity = 100/112 (89.29%), Postives = 104/112 (92.86%), Query Frame = 0 
Query:    1 CFFQIHRFEVTWLGLHTFREVFGAFAMKDRGFARCKLDVERALRETAGSRAGGFEGFSRKMRKGKEGAAAAGWEEGATPDTKHGVRRGRAYGRLRRVMHSPDALSLLQTLTS 112
            C  +IHR EVTWLGLH FREVFGAFAMKDRGFARCKLDVERALRETAGSR GGFEGFSRK+RKGKEGAAAAG EEGAT DT+HGVRRGRAYGRLRRV+ SPDALSLLQTLTS
Sbjct:  192 CVCKIHRSEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKIRKGKEGAAAAGCEEGATSDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 303
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10998.863.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y0_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.610e-58
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0 
Query:    1 CFFQIHRFEVTWLGLHTFREVFGAFAMKDRGFARCKLDVERALRETAGSRAGGFEGFSRKMRKGKEGAAAAGWEEGATPDTKHGVRRGRAYGRLRRVMHSPDALSLLQTLTS 112
            C  + HRF+VTW+GL  FREVFGAF MKDRGFARCKL VE ALRETAGSR GGFEGFSRK+RKGKEGAAAAGWEE ATPDT+HGVRRGRAYGRLRRV+ SPDALSLLQTLTS
Sbjct:  125 CVCKNHRFQVTWVGLPAFREVFGAFPMKDRGFARCKLHVESALRETAGSRGGGFEGFSRKIRKGKEGAAAAGWEEEATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 236
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10998.863.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W1_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.470e-56
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0 
Query:    1 CFFQIHRFEVTWLGLHTFREVFGAFAMKDRGFARCKLDVERALRETAGSRAGGFEGFSRKMRKGKEGAAAAGWEEGATPDTKHGVRRGRAYGRLRRVMHSPDALSLLQTLTS 112
            C  +IHRFEVTWLGLH FREVFGAFA KDRGFARCKLDVERALRETAG   GGF+GFSRKM KGKEGAAAAGWE GATPDT+HGVRRGRAYGRLRRV+ SPDALSLLQTLTS
Sbjct:  561 CVCKIHRFEVTWLGLHAFREVFGAFARKDRGFARCKLDVERALRETAGFWGGGFDGFSRKMCKGKEGAAAAGWEGGATPDTQHGVRRGRAYGRLRRVVRSPDALSLLQTLTS 672
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10998.863.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G6_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.010e-55
Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0 
Query:    1 CFFQIHRFEVTWLGLHTFREVFGAFAMKDRGFARCKLDVERALRETAGSRAGGFEGFSRKMRKGKEGAAAAGWEEGATPDTKHGVRRGRAYGRLRRVMHSPDALSLLQTLTS 112
            C  +IHRFEVTWLGLH FREVFGAFAMKDRGFARCKLDVERALRETAGSR GGFEGFSRK+R+GKEGAAAAG EEGAT DT+HGVRRGRA+GRL+RV+ SPDALSLLQTLTS
Sbjct:  760 CVCKIHRFEVTWLGLHAFREVFGAFAMKDRGFARCKLDVERALRETAGSRGGGFEGFSRKVRQGKEGAAAAGCEEGATSDTQHGVRRGRAHGRLQRVVRSPDALSLLQTLTS 871
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10998.863.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Telomerase1.090e-6089.29reverse transcriptase n=1 Tax=Ectocarpus siliculos... [more]
Telomerase1.610e-5884.82reverse transcriptase n=1 Tax=Ectocarpus siliculos... [more]
Telomerase1.470e-5687.50reverse transcriptase n=1 Tax=Ectocarpus sp. CCAP ... [more]
Telomerase1.010e-5587.50reverse transcriptase n=1 Tax=Ectocarpus siliculos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10998contigEcto-sp9_F_contig10998:46..384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10998.863.1mRNA_Ecto-sp9_F_contig10998.863.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10998 46..384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10998.863.1 ID=prot_Ecto-sp9_F_contig10998.863.1|Name=mRNA_Ecto-sp9_F_contig10998.863.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=113bp
CFFQIHRFEVTWLGLHTFREVFGAFAMKDRGFARCKLDVERALRETAGSR
AGGFEGFSRKMRKGKEGAAAAGWEEGATPDTKHGVRRGRAYGRLRRVMHS
PDALSLLQTLTS*
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