prot_Ecto-sp9_F_contig1099.858.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1099.858.1
Unique Nameprot_Ecto-sp9_F_contig1099.858.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length576
Homology
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI)

HSP 1 Score: 1076 bits (2783), Expect = 0.000e+0
Identity = 559/575 (97.22%), Postives = 561/575 (97.57%), Query Frame = 0
Query:    1 MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 575
            MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK          VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFP+LLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVL YDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKP  AD DGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL
Sbjct:    1 MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK----------VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 565          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA)

HSP 1 Score: 646 bits (1667), Expect = 1.040e-226
Identity = 351/564 (62.23%), Postives = 418/564 (74.11%), Query Frame = 0
Query:   15 PPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPR--RGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQ---GLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPN-AELLLDDD 572
            PPP    ++ T+ CC+CS PI PNPT MCV CIRTQVDITEGIA   T+ QCRGC R+L+P WVE  LESRELMA+CLRK+SGL +VKLVDASW+WTE HSRRLK+KLTVQKEV NGA+LQQA++V F VRNQQC  C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKHNAH    N+QT KDGMDF++ E++ +AR + FLE V+P          C +K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE+LG  +RLAV QRI++ +  VDP+TAQTADV  + Y R+EF ALLSSTRLVP+VVLG EPLP    PSAP   +G R+R+AR+AEV +ARECDLG ND + TA+SHLGH+L+AGDTVLGYDV+SANLPE    G LK  LPDVVLVRKVY      G GK  R W+L  LEKD            KRD  A + DYERF+QQLE+DK+MRRQVNL+K    G AAK       G  +D  E+DEE++R++ELLD M LD+ +A PD  +      A +F AG AP  N A L LDD+
Sbjct:    8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIP----------CRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPL---PSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRG-LKTALPDVVLVRKVYT----SGAGK--RAWRLEALEKD------REAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKT------GGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGD------AQVFSAGEAPGVNFAALALDDE 533          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA)

HSP 1 Score: 514 bits (1323), Expect = 3.570e-174
Identity = 273/523 (52.20%), Postives = 355/523 (67.88%), Query Frame = 0
Query:   25 TILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRY------EFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGR-LPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQ------GLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTL 534
            T+LCC C  PI  NP+ MC  C+  + DITEGIAT L++H+CRGC+R+LRP WV  +LES+ELMA+CLRKI GL KV LVDA WIWTEPHS RLK+K+T+QKEV  GA+LQQ+ VV FV+RNQQC+ C   +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+F+DGMDFYF EK+ + RF DFL+G +P +          +K++KKL+S+DNHSNIFNF +T+L  ++P+CKDDL +LP RLA++L +IS L + +R+T  V  VDPLT   A    + Y +        F  ++S+ RL+ Y+VLG EP+    R  A  +  +  K R+A VE+AR  DLG ND +   VSHLGHILR GDTVLGYDVS+ANL + +     K R LP+VVLVRK+Y    +       R W L +LE D           +K D  +   DYERF+QQLE DK+MR+ VNLY++        AA   P +ED   ED  EMDEE+V +DELL+ + +
Sbjct:   18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVR----------IKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKS-KTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYGVESQR------RGWTLRKLEYDA--VEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEED--EMDEEQVHIDELLEGLDI 519          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 500 bits (1287), Expect = 2.030e-169
Identity = 263/523 (50.29%), Postives = 351/523 (67.11%), Query Frame = 0
Query:   19 PEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEE----VRLDELLDAMTLD 535
            PE+ +P ILCCMC++PI  N  +MCV C++ QVD+TEGI   + MHQCRGC ++ RP WV  +LESREL+A+CL+KISGL KVKLVDA W+WTEPHS+RLK+KLTVQKEV NGA+LQQ+ VVTF+VRNQQCD C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH  H + ++I++  DG+DF+F E++H+ RFVDFL   VP K          +K +KKL+SADNHSN  N+ +TY V L  VCKDDLV LP +LA  LGNIS L +  ++TS++  +DP T Q A++  +KYWRY F AL SS +LV Y VL + PL        P R +R  K R+AE+E+ R  D G ND R    +HLG +L  GDT +GYD+S++  N  + +   +    LPDV+LVRK + R  +    K  R+WKL  +E             +K ++   E DY+ FL +LE DK+MR ++N+YK          D+D A +D +  D++E    + ++ELLD M ++
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIK----------LKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNR--KTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQ----KRSRNWKLKNIE-----GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK---------VDDDKAGDDQDMEDDDEGTGVIPVEELLDDMKIE 497          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 498 bits (1282), Expect = 1.320e-168
Identity = 270/524 (51.53%), Postives = 357/524 (68.13%), Query Frame = 0
Query:   22 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPP-PADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGP 541
            QMPTILCCMC+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV  +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV +  ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+E++H+ RFVDFL+  VP K          VK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q +TS++  VDP T Q A+V  EKYWRY F AL S   +    VL + P+   A PS   R  R+ RK R+A++E+ R+ D G ND R   VSHLG +L  GD+  GYD++SA   + +    ++    LPDVVLV+K++PR  +    K  R+WKL ++E              K D +  E+DYE+F+ +LE DK+MR Q+NLYK     KP  PA++D AM D +++    V L ELLD + + + +  P
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKD--ETKPAQPAEDDDAM-DEDDVGAPAVELHELLDDLAMKDDDPTP 505          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 498 bits (1281), Expect = 1.750e-168
Identity = 268/517 (51.84%), Postives = 353/517 (68.28%), Query Frame = 0
Query:   22 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPP-PADEDGAMEDVEEMDEEEVRLDELLDAMTL 534
            QMPTILCCMC+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV  +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV +  ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+E++H+ RFVDFL+  VP K          VK +KKL+SADNHSN  N+ +TY V + PVCKDDLVLLP +LA  LGN+S L + Q +TS++  VDP T Q A++  EKYWRY F AL S   +  + VL + P+   A PS   R  R+ RK R+A++E+ R+ D G ND R   VSHLG +L  GD+  GYD++SA   + +    ++    LPDVVLV+K++PR  +    K  R+WKL ++E              K D +  E+DYE+FL +LE DK++R Q+NLYK     KP  PAD+D   ED  ++    V L ELLD + +
Sbjct:    7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDT--KPAKPADDDAMEED--DVGAPAVELHELLDDLAM 497          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 493 bits (1269), Expect = 1.060e-166
Identity = 261/523 (49.90%), Postives = 345/523 (65.97%), Query Frame = 0
Query:   20 EKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAG 540
            E  +P ILCC+C++PI  N  +MCV C++ QVD+TEGI   + MHQCRGC ++ RP WV  +LESREL+A+CL+KI+GL KVKLVDA WIWTEPHS+RLK+KLTVQKEV NGA+LQQ+ +VTF+VRNQQCD C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH  H + TNI++  DG+DF+F E++H+ RFVDFL+  VP            +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV LP +LA  LGNIS L +  ++TS++  +DP T Q A++  EKYWRY F AL SS +L  Y VL + P+    +   P R +R  K R+AE+E+ R  D G ND R   VSHLG +L  GDT +GYD+ ++  N  + +   +    LPDVVLVRK + R  +    K  R WKL  +E           + +K D    + DYE FL  LE DK+MR ++N+YK                  +E+ D  ++ LDELLD MT+++   G
Sbjct:    5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPIS----------LKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVPVRTNR--KTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQ----KRQRKWKLKTIE-------GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXX----XXXXXXXASMEDGDGGDIPLDELLDDMTMEDQENG 500          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA)

HSP 1 Score: 494 bits (1272), Expect = 9.760e-166
Identity = 282/572 (49.30%), Postives = 368/572 (64.34%), Query Frame = 0
Query:   27 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLR----PGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWR--YEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATG-DLKGR--LPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADED--------------------------------------------GAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEE 545
            +CCMC++ I PNPT+MC+ C+RTQV+I  G++T +TMHQCRGC +Y+      GW   + ESRELMAVCLRK++GL +++LVDA WIWTEPHS+RLK+KLTVQ+EV NGAVLQ+A+VV FVVRNQQC  C A++T   W A+VQVRQRVDHKRTF +LEQLILKHNAH+Q   IQ F DGMDFYF E++ +ARF +FLE   P +          VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL +  R+ + +  +DPLT QTA+V+ EKY +  +EF ALLS++RLV ++VLG+EP     + SAP R  R ++ R+AEVE+A   DLG ND R    +HLGHILRAGDTVLGY +++A+L   +A   + K R  LPD VLVRKVY        G+    W+L + E D         V E  +    ++D   + QQLE D++MRR+VN+YK G        D D                                            G  EDV E DEE +RLDELLD + LD+ +A PD  E
Sbjct:   18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVR----------VKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPAR--RSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNE-----GRIRPAWRLKKFEAD------EMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHE 566          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APN2_PLAHL)

HSP 1 Score: 488 bits (1255), Expect = 1.430e-164
Identity = 263/527 (49.91%), Postives = 349/527 (66.22%), Query Frame = 0
Query:   23 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEE-----VRLDELLDAMTLDNANAGP 541
            MPTILCCMC+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV   LESREL+A+CL+KI+ L +VKL+DA+W+WTEPHSRRLK+KLTVQKEV +  ++QQA VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++  DG+DF+F+E++H+ RFVDFL+  VP K          VK +KKL+SADNHSN  N+ +TY V + PVCKDDLV+LP +LA  LGNIS L + Q +TS++  VDP T Q A++  EKYWRY F AL S   +  + +L + P+   A PS   R  R+ RK R+A++E+ R+ D G ND R   VSHLG IL AGD+  GYD++SA   + +    ++    +PDVVLV+K +P   +    K  R+WKL ++E              K D +  E+DYE+FL +LE +KD+R Q+NLYK               MED    +E++     V L ELLD + + +  + P
Sbjct:    5 MPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAADLESRELLALCLKKITNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQAFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPVKLARMLGNISCLCLIQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFHALRSIKAMSNFTILDSSPM---AIPSGGGRAIRVSRKTRLADLEIVRDVDFGVNDTRFRTVSHLGMILHAGDSARGYDLTSAVFNDADLVPLVQSGISMPDVVLVKKTFPSRIQ----KRTRNWKLKKIE-----GVEQAGTVRKTDLSKEEQDYEQFLDELEENKDLRSQINLYKDETKLSE-------RMEDNNTFEEDDAGAPAVELHELLDDLVMRDDESAP 502          
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8L1_BRELC)

HSP 1 Score: 487 bits (1253), Expect = 3.070e-164
Identity = 262/538 (48.70%), Postives = 357/538 (66.36%), Query Frame = 0
Query:   22 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRG-HRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFE 556
            QMPTILCC+C+ PI  N  + CV C+++QVD+TEGI   + +HQCRGC R+ RP WV  +LESREL+A+CL+KI+ L +VKL+DA+W+WTEPHSRRLK+KLTVQKEV +  ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFFYLEQLILKH AH + T I++  DG+DF+F+E++H+ RF+DFL+  VP K          +K +KKL+SADNHSN  N+ +TY V + PVCKDDLV+LP +LA  LGNIS L +   +TS++  VDP + Q A+V  EKYWRY F AL S   +  + +L + P+   A PS   R  H  RK R+A++E+ R+ D G ND R   VSHLG IL  GD   GYD++SA   + +    ++    LPDVVLV+KV+PR  +    K  R+WKL ++E           + +  D +  ++DYE+FL +LE DK++R ++NLYK          D+D AM + ++M    V L ELLD + +    +      ++ A  AS++E
Sbjct:    4 QMPTILCCLCATPIVANAANTCVNCLKSQVDVTEGINKEIIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFYLEQLILKHRAHEKTTTIESHPDGVDFFFSERNHALRFIDFLQESVPMK----------LKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPLKLARMLGNISCLCLVASVTSSIHVVDPFSTQVAEVDSEKYWRYPFRALRSIKTMSDFTILDSNPM---AIPSGGGRAIHVTRKTRLADMEIVRDSDFGVNDTRFRTVSHLGMILHVGDFARGYDLTSAVFNDADLIPLVQSGTALPDVVLVKKVFPRRIQ----KRARNWKLKKME----GVEHAGPIRKTTDLSKEDRDYEQFLDELEEDKELRSKINLYKIETTVSKHVKDDDDAMVE-DDMGAPSVELHELLDDLAVKETESTLQILSEVEAKQASVWE 519          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
60S0.000e+097.22ribosomal export protein NMD3 n=2 Tax=Ectocarpus T... [more]
60S1.040e-22662.23ribosomal export protein NMD3 n=1 Tax=Tribonema mi... [more]
60S3.570e-17452.20ribosomal export protein NMD3 n=1 Tax=Rhizochromul... [more]
60S2.030e-16950.29ribosomal export protein NMD3 n=4 Tax=Saprolegniac... [more]
60S1.320e-16851.53ribosomal export protein NMD3 n=18 Tax=Peronospora... [more]
60S1.750e-16851.84ribosomal export protein NMD3 n=9 Tax=Peronosporac... [more]
60S1.060e-16649.90ribosomal export protein NMD3 n=1 Tax=Aphanomyces ... [more]
60S9.760e-16649.30ribosomal export protein NMD3 n=2 Tax=Monodopsidac... [more]
60S1.430e-16449.91ribosomal export protein NMD3 n=1 Tax=Plasmopara h... [more]
60S3.070e-16448.70ribosomal export protein NMD3 n=1 Tax=Bremia lactu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 28..264
e-value: 7.4E-71
score: 238.4
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 20..535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1099contigEcto-sp9_F_contig1099:12300..16023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1099.858.1mRNA_Ecto-sp9_F_contig1099.858.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1099 12155..17046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1099.858.1 ID=prot_Ecto-sp9_F_contig1099.858.1|Name=mRNA_Ecto-sp9_F_contig1099.858.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=576bp
MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQ
VDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKK
VKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCD
TCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFK
DGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNH
SNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQ
FVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSA
PRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYD
VSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELE
KDGGDGGGGGGVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLA
AKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAA
SASIFEAGAAPAPNAELLLDDDPEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007064Nmd3_N
IPR039768Nmd3