prot_Ecto-sp9_F_contig10984.854.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10984.854.1
Unique Nameprot_Ecto-sp9_F_contig10984.854.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length346
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10984.854.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT2_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.300e-82
Identity = 301/346 (86.99%), Postives = 303/346 (87.57%), Query Frame = 0 
Query:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSPPAASADDRAAVAGGDDYGSVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAPAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFLFDMEGLKDTTLEDQLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVEVKGRNG-GASCRGVVPQQQEGTTERTAAGRGLSPAXXXXXXAAREVSYAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC 345
            MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYP YDSPPA                 VSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAPAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FDMEGLK+TT       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EV+GRN  GA CRGVVPQQQEGTT RTAAGRGLSPA      AA EVS AGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC
Sbjct:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPQYDSPPAXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMSKEVVEVGQAGAPAAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXFDMEGLKETTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEGRNNAGAPCRGVVPQQQEGTTARTAAGRGLSPAEAAAGGAACEVSCAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC 345
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BLAST of mRNA_Ecto-sp9_F_contig10984.854.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ3_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.920e-35
Identity = 75/94 (79.79%), Postives = 75/94 (79.79%), Query Frame = 0 
Query:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSPPAASADDRAAVAGGDDYGSVSSGGRSAFSPAVSDYAGVFEAGFDPAQ 94
            MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSP                   VSSGGRSAFSPAVSDYAGVFEAGFDPAQ
Sbjct:    1 MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSPXXXXXXXXXXXXXXXXXXXVSSGGRSAFSPAVSDYAGVFEAGFDPAQ 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10984.854.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.300e-8286.99protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.920e-3579.79protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10984contigEcto-sp9_F_contig10984:1676..2713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10984.854.1mRNA_Ecto-sp9_F_contig10984.854.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10984 1674..2713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10984.854.1 ID=prot_Ecto-sp9_F_contig10984.854.1|Name=mRNA_Ecto-sp9_F_contig10984.854.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=346bp
MFALRSSPSSLVCDIRDGWAATSTAVLSAPRPRRASVRLIYPHYDSPPAA
SADDRAAVAGGDDYGSVSSGGRSAFSPAVSDYAGVFEAGFDPAQVRASMS
KEVVEVGQAGAPAAAMAAEEAAALVVEERRAFAAGGGGARDCREWRDDDD
GDDGAGISRGQHAAACSSAAALAAGGGVAREEEDSLSCCEEEEDFLFDME
GLKDTTLEDQLEDNNNSNRRDSGGSSSMRAAAAAAAADYYGYSRGGGWGT
TMTAAAAAVPVEVKGRNGGASCRGVVPQQQEGTTERTAAGRGLSPAAAAG
GGAAREVSYAGFKGAALLRTPRVIAPRGTRCVTGGMYRLRLSTSC*
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