prot_Ecto-sp9_F_contig10982.853.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10982.853.1
Unique Nameprot_Ecto-sp9_F_contig10982.853.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM0_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 3.230e-74
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0
Query:    1 RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            RKTLASRQGGGGSAD GEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE
Sbjct:   22 RKTLASRQGGGGSADGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone-fold-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.960e-45
Identity = 88/123 (71.54%), Postives = 100/123 (81.30%), Query Frame = 0
Query:    1 RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            +KT A  Q  GG A+  +PRKRR  +PGE+ALKEIRAYQR+TELL+RKLPFARLVKEVQ + TP G  YRW A A+LALQEAAEAHLV LFEDANL  +HAKRVTIM +D QLARRIRG+ RE
Sbjct:   24 KKTAARAQAKGG-AEQLKPRKRR-HKPGEKALKEIRAYQRSTELLIRKLPFARLVKEVQTSFTPGGLQYRWAATAVLALQEAAEAHLVGLFEDANLACIHAKRVTIMPKDMQLARRIRGRLRE 144          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.780e-43
Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 0
Query:   12 GSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            G+A A    ++RR +PGE+ALKEIR YQR+TELL+RKLPFARLV+EVQE  TP G  YRW A ALLALQ AAEAHLV LFEDANL A+HAKRVTI  RD QLARRIRG+ RE
Sbjct:   12 GAAAAVRGARQRRHKPGEKALKEIRTYQRSTELLIRKLPFARLVREVQEMFTPRGVLYRWAADALLALQHAAEAHLVGLFEDANLAAIHAKRVTIQPRDMQLARRIRGRMRE 123          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.910e-42
Identity = 75/102 (73.53%), Postives = 89/102 (87.25%), Query Frame = 0
Query:   22 RRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            ++R+RPGERALKEIR YQR+T+LL+R+LPFARLV+EVQ ++    K YRWQA A+LALQEAAEAHL SLFEDANLCA+H KRVT+M +DFQLARRIRG  RE
Sbjct:   39 KKRYRPGERALKEIRYYQRSTDLLIRRLPFARLVREVQVSIVSNKKEYRWQADAILALQEAAEAHLSSLFEDANLCAIHGKRVTVMPKDFQLARRIRGPMRE 140          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX25_NANGC)

HSP 1 Score: 143 bits (360), Expect = 1.150e-41
Identity = 83/115 (72.17%), Postives = 92/115 (80.00%), Query Frame = 0
Query:    9 GGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            G G S    E  K+RR RPG RAL+EIR YQRTTELLLR+LPFARLV+EVQ  ++   K YRWQA +LLALQEAAEAHLV LFEDANLCA+HAKRVTIM +D QLARRIRG  RE
Sbjct:   18 GKGTSPRKDEEPKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEIST--KQYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRE 130          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JND5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.240e-41
Identity = 75/103 (72.82%), Postives = 90/103 (87.38%), Query Frame = 0
Query:   21 KRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            K+ R RPG RALKEIR YQR+T+LLLRKLPFARLV+E+Q++     +  RWQA A++ALQEAAEAHLV+LF+DANLCA+HAKRVT+MVRD QLARRIRGQ+RE
Sbjct:   21 KKHRLRPGMRALKEIRKYQRSTDLLLRKLPFARLVREIQQSFVQ--RDLRWQAEAIIALQEAAEAHLVALFQDANLCAIHAKRVTLMVRDLQLARRIRGQARE 121          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDC5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.270e-41
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 0
Query:   23 RRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            RR RPGERALKEIR YQR+T+LL+RKLPFARLV+EV    T   K YRWQA+ALLALQE+AEAHLV LFEDANLC +H+KRVT+MV+D QLARRIRG  RE
Sbjct:    1 RRHRPGERALKEIRTYQRSTDLLIRKLPFARLVREVMLQFT--NKEYRWQASALLALQESAEAHLVHLFEDANLCTIHSKRVTVMVKDIQLARRIRGPMRE 99          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEK9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.990e-41
Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 0
Query:   20 RKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            R++RR RPGERALKEIR YQ +T+LL+R+LPFARLV+E+Q+ L+   ++Y WQA+A+LALQEAAEAHLV LFED NLCA+HAKRVTIM +D QLARRIRGQ+RE
Sbjct:   47 RRKRRMRPGERALKEIRQYQNSTDLLIRRLPFARLVREIQQGLSR--RAYSWQASAILALQEAAEAHLVGLFEDCNLCAVHAKRVTIMPKDMQLARRIRGQTRE 148          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGE4_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 3.700e-41
Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 0
Query:   12 GSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQ 120
            G+  A  P+  RR+RPG  AL+EIR YQR+TELLLRKLPFARLV+E+Q   TP  + YRWQA ALLALQEAAEAHLV LFEDANLCA+HAKRVT+MV+D QLARRIRG+
Sbjct:   49 GTPSASAPK--RRYRPGTVALREIRFYQRSTELLLRKLPFARLVREIQMEFTP--REYRWQAEALLALQEAAEAHLVRLFEDANLCAIHAKRVTLMVKDIQLARRIRGR 153          
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TAQ9_PHATR)

HSP 1 Score: 140 bits (352), Expect = 8.540e-41
Identity = 71/105 (67.62%), Postives = 92/105 (87.62%), Query Frame = 0
Query:   19 PRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 123
            P+++RR RPG++ALKEI+ YQ++T+LL+R+LPFARLV+E+Q  ++   ++YRWQ  A+LALQEA+EAHLVSLFED NLCALH KRVTIM +D QLARRIRGQ+RE
Sbjct:    2 PKRKRRMRPGQKALKEIKMYQKSTDLLIRRLPFARLVREIQMEMSR--EAYRWQGTAILALQEASEAHLVSLFEDTNLCALHGKRVTIMPKDMQLARRIRGQTRE 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Histone3.230e-7499.19domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Histone-fold-containing1.960e-4571.54protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Histone2.780e-4372.32H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A8... [more]
Hypothetical1.910e-4273.53protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Histone1.150e-4172.17H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP52... [more]
Hypothetical1.240e-4172.82protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical1.270e-4175.25protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.990e-4172.12protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Uncharacterized3.700e-4172.48protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical8.540e-4167.62protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..123
NoneNo IPR availablePANTHERPTHR45810FAMILY NOT NAMEDcoord: 16..120
NoneNo IPR availablePANTHERPTHR45810:SF3coord: 16..120
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 84..100
score: 75.83
coord: 100..121
score: 74.01
coord: 1..12
score: 25.22
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 17..122
e-value: 3.8E-55
score: 199.2
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 50..58
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..121
e-value: 4.1E-50
score: 171.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..119
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..118
e-value: 9.0E-40
score: 136.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10982contigEcto-sp9_F_contig10982:153..2257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10982.853.1mRNA_Ecto-sp9_F_contig10982.853.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10982 153..2257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10982.853.1 ID=prot_Ecto-sp9_F_contig10982.853.1|Name=mRNA_Ecto-sp9_F_contig10982.853.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLP
FARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALH
AKRVTIMVRDFQLARRIRGQSRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3