prot_Ecto-sp9_F_contig10981.852.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10981.852.1
Unique Nameprot_Ecto-sp9_F_contig10981.852.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length129
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10981.852.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.400e-55
Identity = 108/130 (83.08%), Postives = 111/130 (85.38%), Query Frame = 0 
Query:    1 MKQLAAATFSRPASTAAIGESGGGG-DGRYDAEEVVFSELSDQHDKAEDGLLAGMVVEVLAALSAGLPRLEEAAVLSWKGLRAVYPRGYGASYSHVGGVLGGLRRQGASLLSSPVSLRFFLHLHRYGGTT 129
            MKQLAAAT SRPA             D  YDAE+ VFSELS+QHDKAEDGLLAGMVVEVLAALSAGLPR EEAAVLSWKGLRAVYPRGYGA YSHVGGV+GGLRRQGASLLSSPVSLRFFLHLHRYGGTT
Sbjct: 1460 MKQLAAATSSRPAXXXXXXXXXXXXXDDLYDAEDAVFSELSEQHDKAEDGLLAGMVVEVLAALSAGLPRSEEAAVLSWKGLRAVYPRGYGAGYSHVGGVVGGLRRQGASLLSSPVSLRFFLHLHRYGGTT 1589
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BLAST of mRNA_Ecto-sp9_F_contig10981.852.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G721_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.020e-54
Identity = 108/130 (83.08%), Postives = 111/130 (85.38%), Query Frame = 0 
Query:    1 MKQLAAATFSRPASTAAIGESGGGG-DGRYDAEEVVFSELSDQHDKAEDGLLAGMVVEVLAALSAGLPRLEEAAVLSWKGLRAVYPRGYGASYSHVGGVLGGLRRQGASLLSSPVSLRFFLHLHRYGGTT 129
            MKQLAAAT SRPAS            D  YDAE+VVFSELS+QHDKAEDGLLAGMVVEVLAALSAGLPR EEAAVLSWKGLRAVYPRGYGA YS VGGV+GGLRRQGASLLSSPVSLRFFLHLHRY GTT
Sbjct:  651 MKQLAAATSSRPASXXXXXXXXXXXXDDLYDAEDVVFSELSEQHDKAEDGLLAGMVVEVLAALSAGLPRSEEAAVLSWKGLRAVYPRGYGAGYSRVGGVVGGLRRQGASLLSSPVSLRFFLHLHRYSGTT 780
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10981.852.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6E0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 4.630e-46
Identity = 91/113 (80.53%), Postives = 97/113 (85.84%), Query Frame = 0 
Query:    1 MKQLAAATFSRPASTAAIGESGGGGDGRYDAEEVVFSELSDQHDKAEDGLLAGMVVEVLAALSAGLPRLEEAAVLSWKGLRAVYPRGYGASYSHVGGVLGGLRRQGASLLSSP 113
            MKQLA+AT SRPASTAAI  SGGGGD  YDAEE VFSELS+QHD+AEDGLLAGMVVEVLAALSAGLPR EE AVLSWKGLRAVYPRGYGA YSH+GGV+GGLR +    L  P
Sbjct: 1054 MKQLASATSSRPASTAAIDTSGGGGDDLYDAEEAVFSELSEQHDRAEDGLLAGMVVEVLAALSAGLPRSEEGAVLSWKGLRAVYPRGYGAGYSHIGGVVGGLRSRLRGQLQFP 1166
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10981.852.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized2.400e-5583.08protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.020e-5483.08protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.630e-4680.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10981contigEcto-sp9_F_contig10981:444..2269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10981.852.1mRNA_Ecto-sp9_F_contig10981.852.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10981 444..2621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10981.852.1 ID=prot_Ecto-sp9_F_contig10981.852.1|Name=mRNA_Ecto-sp9_F_contig10981.852.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=129bp
MKQLAAATFSRPASTAAIGESGGGGDGRYDAEEVVFSELSDQHDKAEDGL
LAGMVVEVLAALSAGLPRLEEAAVLSWKGLRAVYPRGYGASYSHVGGVLG
GLRRQGASLLSSPVSLRFFLHLHRYGGTT
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