prot_Ecto-sp9_F_contig10938.822.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10938.822.1
Unique Nameprot_Ecto-sp9_F_contig10938.822.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10938.822.1 vs.
Match: Avl9 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT00_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.640e-42
Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 0 
Query:    1 KSVSYWGGASSKPTDARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDEQGQPTLPLSTADIHVLRSDMPFKALPENGL 79
            KSVSY GGASSKP DARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDEQGQPTLPLSTADIHVLRSDMPFKALPENGL
Sbjct:   92 KSVSYRGGASSKPMDARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDEQGQPTLPLSTADIHVLRSDMPFKALPENGL 170
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BLAST of mRNA_Ecto-sp9_F_contig10938.822.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK75_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.470e-41
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0 
Query:    2 SVSYWGGASSKPTDARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDEQGQPTLPLSTADIHVLRSDMPFKALPENGL 79
            SVSY  G+SSKP DARQGEMPIALVAIVTFDLRQGPCLVCVDPPIED+QGQPTLPL+ ADIHVLRSDMPFKALPENGL
Sbjct:  109 SVSYRAGSSSKPMDARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDDQGQPTLPLTAADIHVLRSDMPFKALPENGL 186
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10938.822.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Avl91.640e-4297.47domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized2.470e-4191.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10938contigEcto-sp9_F_contig10938:1220..2168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10938.822.1mRNA_Ecto-sp9_F_contig10938.822.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10938 1219..2168 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10938.822.1 ID=prot_Ecto-sp9_F_contig10938.822.1|Name=mRNA_Ecto-sp9_F_contig10938.822.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=79bp
KSVSYWGGASSKPTDARQGEMPIALVAIVTFDLRQGPCLVCVDPPIEDEQ
GQPTLPLSTADIHVLRSDMPFKALPENGL
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