prot_Ecto-sp9_F_contig10911.796.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10911.796.1
Unique Nameprot_Ecto-sp9_F_contig10911.796.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length155
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10911.796.1 vs.
Match: Helicase_C_4 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.500e-49
Identity = 87/103 (84.47%), Postives = 96/103 (93.20%), Query Frame = 0 
Query:    1 MTFQQILPKYHFAKEETRRRIELAKRMQAERVAAGNKVIQRQIFSKTGFWTRRSGTEVYMLVDYPGRVSSGYSTHGVKLPMAVWSPCRGRFEISYKMFMNNGF 103
            MTFQQILPKYHFAKEET RRIELAK+MQAERVAAGNKV QRQIFSKTGFWT+RSGTEVY++VDYPGRV+SGYST+GVK P+ VWSPCRGR EISYK F+N+ F
Sbjct:  134 MTFQQILPKYHFAKEETDRRIELAKKMQAERVAAGNKVNQRQIFSKTGFWTKRSGTEVYLVVDYPGRVTSGYSTYGVKRPVTVWSPCRGRVEISYKAFLNHHF 236
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10911.796.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Helicase_C_41.500e-4984.47domain-containing protein n=1 Tax=Ectocarpus silic... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10911contigEcto-sp9_F_contig10911:1183..4092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10911.796.1mRNA_Ecto-sp9_F_contig10911.796.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10911 1126..4145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10911.796.1 ID=prot_Ecto-sp9_F_contig10911.796.1|Name=mRNA_Ecto-sp9_F_contig10911.796.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=155bp
MTFQQILPKYHFAKEETRRRIELAKRMQAERVAAGNKVIQRQIFSKTGFW
TRRSGTEVYMLVDYPGRVSSGYSTHGVKLPMAVWSPCRGRFEISYKMFMN
NGFVRSTEAEASHLWDMEMIRAVHLRPASQSLLLASSRLTSRTRTFSCSA
GLGC*
back to top