prot_Ecto-sp9_F_contig1087.759.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1087.759.1
Unique Nameprot_Ecto-sp9_F_contig1087.759.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length648
Homology
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Divergent (RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 585 bits (1509), Expect = 3.790e-205
Identity = 300/308 (97.40%), Postives = 301/308 (97.73%), Query Frame = 0
Query:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKASSSKKGSSPARRGRKRLSVSLKGVMERKGDLDTASSCAAQSGIGRSPAN 308
            MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDF VNGGEVS EDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKA SSKKGSSPARRGRKRLSVSLKGVMER GD D ASSCAAQSGIGRSP+N
Sbjct:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSSPARRGRKRLSVSLKGVMERNGDRDIASSCAAQSGIGRSPSN 307          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.440e-30
Identity = 63/128 (49.22%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   72 VRLVLVGGCDTGKTCLLRRFLGGYF--DDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKAD 197
            VRLV+VG C  GKT ++RR+L GYF  D      Y+      TLGVDFGC+TV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D    E+ + ++  W P +  + P   R LL GNK D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSS-----TLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCD 127          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Uncharacterized (protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 127 bits (320), Expect = 6.120e-30
Identity = 71/201 (35.32%), Postives = 111/201 (55.22%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAE 256
            +S D + + +LVL+G    GK+CLL RF GG        Y  D    D   ++   T+GVDF  RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D   + +V     S E AK FA+++     ETSAK   NV+ A + +  E++  R+   +
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVND-WLNEVNRYASEGTCKLLVGNKSDISDNKAV-----SYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGD 195          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Ras-related (protein ric1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKI6_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 2.410e-29
Identity = 70/184 (38.04%), Postives = 105/184 (57.07%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            +  D + +  LVL+G    GK+CLL RF     DD     Y       T+GVDF  RT++L  + ++LQ+WDT G E +R++ S Y RGA G+++ +DV ++ +  +++  W   +DK+       LL GNKAD   D  V+  +VS+ED K FAE ++    ETSAK GT VD A + +  E+
Sbjct:    1 MKPDYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSYIS-----TIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNRTSFDNVQR-WLTEIDKYARENVNKLLVGNKADIADD--VHNRQVSQEDGKAFAEKVDVPFLETSAKTGTFVDTAFLMMAHEI 172          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6D0_9DINO)

HSP 1 Score: 125 bits (315), Expect = 8.140e-29
Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            GD + + +++++G C  GK+ LLRRF+ G        +Y+ Q  A T+GVDFG R+  +  ++V+LQ+WDT GSE +RS+ S Y +GA GV++ FDV+ ++T   +   W     KH P + R +L GNK D  G     G  VSR++A   A+ +   + E SAK   NV+ A + L Q V
Sbjct:   24 GDFDFIFKILVIGDCGVGKSSLLRRFVDG--------EYSTQYTA-TIGVDFGQRSCTVDGKKVKLQIWDTAGSERFRSITSGYYKGAHGVIVVFDVSDRKTFDHV-GFWLAEAGKHAPTSARRMLVGNKCDIEGP----GRAVSRDEALELADRLGLPLLEASAKSAENVEAAFLTLAQVV 191          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 124 bits (310), Expect = 2.420e-28
Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            GD + + +LV++G    GK+ LLRRF+ G +D      YT      T+GVDFG R+  L  ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +++   +R  W     K  P T R +L GNK D  G+    G  +SR++A   A+ +   + E SAK   NV+ A ++L + +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTA-----TIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVRY-WLAEAGKSAPVTARRMLVGNKCDLTGE----GRSISRDEAFDLADGLGVPLVEASAKSSENVEEAFLSLARAI 176          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS4_HETAK)

HSP 1 Score: 123 bits (309), Expect = 2.570e-28
Identity = 68/191 (35.60%), Postives = 112/191 (58.64%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAED 257
            D + + +LVL+G    GK+CLL RF     DD   + Y       T+GVDF  +TV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV +KE+   + S W   ++++       LL GNK+D R + + +  +V+ E+AK++A+ +     ETSAK  +NV+ A + +  +++  R+   ED
Sbjct:   30 DYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYIS-----TIGVDFRFKTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVMNKESFEHV-SAWLSEVNRYANEGTCKLLVGNKSD-RAEEAPDARQVAAEEAKKYADDLGIPFIETSAKSASNVEEAFLTMASQLIQLREARGED 209          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Rab1A, (rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.650e-28
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKASSS 262
            D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D R D +V     + E AK FA+++     ETSAK  +NV+ A + +  E++  R+  A  +A SS
Sbjct:    5 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTD---------SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVND-WLSEVNRYASEGTSKLLIGNKSD-RADKAV-----TTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 184          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Rab (GTPase n=2 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7IMV9_THEOR)

HSP 1 Score: 121 bits (304), Expect = 7.860e-28
Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLH 249
            +S D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV + ++RV+LQ+WDT G E +R++ S Y RGADG++M +DV  K +   +   W   ++K+       LL GNK D       +  +V+R D +R +E +E    E SAK G N+D A +++ +++++
Sbjct:    5 ISKDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTD---------SYITTIGVDFRFRTVIVNNKRVKLQIWDTAGQERFRTITSTYYRGADGIIMVYDVTDKASFEHIND-WLNEVNKYASEDTFKLLLGNKCDIE-----DNRDVTRTDVERLSEVIEVPAMEVSAKTGHNIDKAFLSITEKLVN 175          
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Ras (related Rab1a small GTP-binding protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0B2B3_THEEQ)

HSP 1 Score: 120 bits (302), Expect = 1.010e-27
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   65 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVL 248
            S D + + +LVLVG    GK+CLL RF    F D         +   T+GVDF  RT+ + D+RV+LQ+WDT G E +R++ S Y RGADG+++ +D+  K +   + S W   +DK+       LL GNK+D + +  V+  +V     KR +E +   V E SAK G NV+ A  ++ + ++
Sbjct:    6 SKDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTD---------SYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQERFRTITSTYYRGADGIVLAYDLTDKSSFDHI-SDWLAEVDKYAAEDTCKLLVGNKSDIQENRDVDPSDV-----KRLSELVNIPVMEVSAKTGENVEKAFFSITERLV 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Divergent3.790e-20597.40RAB-like GTPase, N-terminal myristoylation predict... [more]
P-loop1.440e-3049.22containing nucleoside triphosphate hydrolase prote... [more]
Uncharacterized6.120e-3035.32protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_... [more]
Ras-related2.410e-2938.04protein ric1 n=1 Tax=Chrysochromulina tobinii TaxI... [more]
Hypothetical8.140e-2938.46protein n=1 Tax=Alexandrium monilatum TaxID=311494... [more]
Hypothetical2.420e-2837.91protein n=1 Tax=Alexandrium catenella TaxID=2925 R... [more]
Hypothetical2.570e-2835.60protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Rab1A,4.650e-2836.73rab family GTPase n=1 Tax=Tribonema minus TaxID=30... [more]
Rab7.860e-2835.48GTPase n=2 Tax=Theileria orientalis TaxID=68886 Re... [more]
Ras1.010e-2736.41related Rab1a small GTP-binding protein n=1 Tax=Th... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 225..247
score: 34.19
coord: 72..93
score: 37.6
coord: 185..198
score: 36.69
coord: 122..144
score: 36.79
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 72..250
e-value: 2.7E-38
score: 143.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 69..250
e-value: 1.7E-7
score: -5.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 74..246
e-value: 8.3E-10
score: 6.6
NoneNo IPR availableGENE3D3.40.50.300coord: 66..276
e-value: 3.9E-45
score: 155.6
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 64..259
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 64..259
NoneNo IPR availablePROSITEPS51419RABcoord: 67..296
score: 22.112
IPR001806Small GTPasePFAMPF00071Rascoord: 73..248
e-value: 1.1E-33
score: 116.2
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 72..240
e-value: 2.1E-18
score: 64.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1087contigEcto-sp9_F_contig1087:17838..23695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1087.759.1mRNA_Ecto-sp9_F_contig1087.759.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1087 17838..23695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1087.759.1 ID=prot_Ecto-sp9_F_contig1087.759.1|Name=mRNA_Ecto-sp9_F_contig1087.759.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=648bp
MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEK
CSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIG
HQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYL
RGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARG
DFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHH
RQFAAEDKASSSKKGSSPARRGRKRLSVSLKGVMERKGDLDTASSCAAQS
GIGRSPANALCADATTTEGTSSVYSSSASHRDGDGSDQENNGRDQEDQGR
MWSMLPSTDDGIILGDGGEDRADDARQEQQQFSALDYSIDGRLSKASRDC
ESESGRRGGGTPPRDSAGDSSHSGFKRGGRYHLINKLVIASPCSRGARTE
DIDVHRCCDRDDQSGGGCRRQPSHVEELDGHNRGTKADNRNVTSFPKPGT
VITPEVQARSMRPVAASRDEASSRVAMGRAPAPVPDERQRLHGGGMAEAG
RDLVVPERKKASVDAALREAPPCHPPAAERSGALSEATVIKTGQERRDVR
RVNGDSDRRSLGCNNPTIASANSSFSTVLAGHDHAHFQLASPVPEQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase