mRNA_Ecto-sp9_F_contig1087.759.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig1087.759.1
Unique Name	mRNA_Ecto-sp9_F_contig1087.759.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Divergent (RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 585 bits (1509), Expect = 3.790e-205
Identity = 300/308 (97.40%), Postives = 301/308 (97.73%), Query Frame = 1

Query:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKASSSKKGSSPARRGRKRLSVSLKGVMERKGDLDTASSCAAQSGIGRSPAN 924
            MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDF VNGGEVS EDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKA SSKKGSSPARRGRKRLSVSLKGVMER GD D ASSCAAQSGIGRSP+N
Sbjct:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSSPARRGRKRLSVSLKGVMERNGDRDIASSCAAQSGIGRSPSN 307

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.440e-30
Identity = 63/128 (49.22%), Postives = 79/128 (61.72%), Query Frame = 1

Query:  214 VRLVLVGGCDTGKTCLLRRFLGGYF--DDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKAD 591
            VRLV+VG C  GKT ++RR+L GYF  D      Y+      TLGVDFGC+TV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D    E+ + ++  W P +  + P   R LL GNK D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSS-----TLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCD 127

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Uncharacterized (protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 127 bits (320), Expect = 6.120e-30
Identity = 71/201 (35.32%), Postives = 111/201 (55.22%), Query Frame = 1

Query:  190 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAE 768
            +S D + + +LVL+G    GK+CLL RF GG        Y  D    D   ++   T+GVDF  RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D   + +V     S E AK FA+++     ETSAK   NV+ A + +  E++  R+   +
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVND-WLNEVNRYASEGTCKLLVGNKSDISDNKAV-----SYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGD 195

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6D0_9DINO)

HSP 1 Score: 125 bits (315), Expect = 8.140e-29
Identity = 70/182 (38.46%), Postives = 106/182 (58.24%), Query Frame = 1

Query:  196 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 741
            GD + + +++++G C  GK+ LLRRF+ G        +Y+ Q  A T+GVDFG R+  +  ++V+LQ+WDT GSE +RS+ S Y +GA GV++ FDV+ ++T   +   W     KH P + R +L GNK D  G     G  VSR++A   A+ +   + E SAK   NV+ A + L Q V
Sbjct:   24 GDFDFIFKILVIGDCGVGKSSLLRRFVDG--------EYSTQYTA-TIGVDFGQRSCTVDGKKVKLQIWDTAGSERFRSITSGYYKGAHGVIVVFDVSDRKTFDHV-GFWLAEAGKHAPTSARRMLVGNKCDIEGP----GRAVSRDEALELADRLGLPLLEASAKSAENVEAAFLTLAQVV 191

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 124 bits (310), Expect = 2.420e-28
Identity = 69/182 (37.91%), Postives = 106/182 (58.24%), Query Frame = 1

Query:  196 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 741
            GD + + +LV++G    GK+ LLRRF+ G +D      YT      T+GVDFG R+  L  ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +++   +R  W     K  P T R +L GNK D  G+    G  +SR++A   A+ +   + E SAK   NV+ A ++L + +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTA-----TIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVRY-WLAEAGKSAPVTARRMLVGNKCDLTGE----GRSISRDEAFDLADGLGVPLVEASAKSSENVEEAFLSLARAI 176

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS4_HETAK)

HSP 1 Score: 123 bits (309), Expect = 2.570e-28
Identity = 68/191 (35.60%), Postives = 112/191 (58.64%), Query Frame = 1

Query:  199 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAED 771
            D + + +LVL+G    GK+CLL RF     DD   + Y       T+GVDF  +TV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV +KE+   + S W   ++++       LL GNK+D R + + +  +V+ E+AK++A+ +     ETSAK  +NV+ A + +  +++  R+   ED
Sbjct:   30 DYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYIS-----TIGVDFRFKTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVMNKESFEHV-SAWLSEVNRYANEGTCKLLVGNKSD-RAEEAPDARQVAAEEAKKYADDLGIPFIETSAKSASNVEEAFLTMASQLIQLREARGED 209

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Rab1A, (rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.650e-28
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 1

Query:  199 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKASSS 786
            D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D R D +V     + E AK FA+++     ETSAK  +NV+ A + +  E++  R+  A  +A SS
Sbjct:    5 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTD---------SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVND-WLSEVNRYASEGTSKLLIGNKSD-RADKAV-----TTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 184

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Ras-related (protein Rab-1A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFY2_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.800e-28
Identity = 65/181 (35.91%), Postives = 105/181 (58.01%), Query Frame = 1

Query:  199 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 741
            + + + +L+L+G    GK+CLL RF     DD   + Y       T+GVDF  RT+++  + ++LQ+WDT G E +R++ S Y RGA G+++ +DV  +E+  +++ TW   +D++       LL GNK+D       N   VS E AK FA+++E +  ETSAK  TNV+ A M +  ++
Sbjct:    5 EYDYLFKLLLIGDSGVGKSCLLLRFA----DDTYTESYIS-----TIGVDFKIRTIEMDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNVK-TWLQEIDRYAAEKVNTLLVGNKSDL-----TNKRVVSYEAAKEFADSVEMEFLETSAKNSTNVEKAFMVMASQI 170

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Rab (GTPase n=2 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7IMV9_THEOR)

HSP 1 Score: 121 bits (304), Expect = 7.860e-28
Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 1

Query:  190 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLH 747
            +S D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV + ++RV+LQ+WDT G E +R++ S Y RGADG++M +DV  K +   +   W   ++K+       LL GNK D       +  +V+R D +R +E +E    E SAK G N+D A +++ +++++
Sbjct:    5 ISKDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTD---------SYITTIGVDFRFRTVIVNNKRVKLQIWDTAGQERFRTITSTYYRGADGIIMVYDVTDKASFEHIND-WLNEVNKYASEDTFKLLLGNKCDIE-----DNRDVTRTDVERLSEVIEVPAMEVSAKTGHNIDKAFLSITEKLVN 175

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BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Match: Ras (related Rab1a small GTP-binding protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0B2B3_THEEQ)

HSP 1 Score: 120 bits (302), Expect = 1.010e-27
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 1

Query:  193 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVL 744
            S D + + +LVLVG    GK+CLL RF    F D         +   T+GVDF  RT+ + D+RV+LQ+WDT G E +R++ S Y RGADG+++ +D+  K +   + S W   +DK+       LL GNK+D + +  V+  +V     KR +E +   V E SAK G NV+ A  ++ + ++
Sbjct:    6 SKDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTD---------SYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQERFRTITSTYYRGADGIVLAYDLTDKSSFDHI-SDWLAEVDKYAAEDTCKLLVGNKSDIQENRDVDPSDV-----KRLSELVNIPVMEVSAKTGENVEKAFFSITERLV 174

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1087.759.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Divergent	3.790e-205	97.40	RAB-like GTPase, N-terminal myristoylation predict...	[more]
P-loop	1.440e-30	49.22	containing nucleoside triphosphate hydrolase prote...	[more]
Uncharacterized	6.120e-30	35.32	protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_...	[more]
Hypothetical	8.140e-29	38.46	protein n=1 Tax=Alexandrium monilatum TaxID=311494...	[more]
Hypothetical	2.420e-28	37.91	protein n=1 Tax=Alexandrium catenella TaxID=2925 R...	[more]
Hypothetical	2.570e-28	35.60	protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re...	[more]
Rab1A,	4.650e-28	36.73	rab family GTPase n=1 Tax=Tribonema minus TaxID=30...	[more]
Ras-related	7.800e-28	35.91	protein Rab-1A n=1 Tax=Hondaea fermentalgiana TaxI...	[more]
Rab	7.860e-28	35.48	GTPase n=2 Tax=Theileria orientalis TaxID=68886 Re...	[more]
Ras	1.010e-27	36.41	related Rab1a small GTP-binding protein n=1 Tax=Th...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1087	contig	Ecto-sp9_F_contig1087:17838..23695 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	589.3
Seed ortholog evalue	2.1e-165
Seed eggNOG ortholog	2880.D8LKI8
KEGG ko	ko:K07874
KEGG Pathway	ko05134,map05134
EggNOG free text desc.	GTPase activity
EggNOG OGs	KOG0084@1,KOG0084@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko04031,ko04131,ko04147
Hectar predicted targeting category	other localisation
Ec32 ortholog description	divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator
Ec32 ortholog	Ec-16_003120.1
Exons	8
Model size	1944
Cds size	1944
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1087.759.1	prot_Ecto-sp9_F_contig1087.759.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig1087 17838..23695 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig1087:17838..23695-
coding sequence from alignment at Ecto-sp9_F_contig1087:17838..23695-

protein sequence of mRNA_Ecto-sp9_F_contig1087.759.1

>prot_Ecto-sp9_F_contig1087.759.1 ID=prot_Ecto-sp9_F_contig1087.759.1|Name=mRNA_Ecto-sp9_F_contig1087.759.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=648bp
MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEK
CSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIG
HQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYL
RGADGVMMCFDVNSKETLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARG
DFSVNGGEVSREDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHH
RQFAAEDKASSSKKGSSPARRGRKRLSVSLKGVMERKGDLDTASSCAAQS
GIGRSPANALCADATTTEGTSSVYSSSASHRDGDGSDQENNGRDQEDQGR
MWSMLPSTDDGIILGDGGEDRADDARQEQQQFSALDYSIDGRLSKASRDC
ESESGRRGGGTPPRDSAGDSSHSGFKRGGRYHLINKLVIASPCSRGARTE
DIDVHRCCDRDDQSGGGCRRQPSHVEELDGHNRGTKADNRNVTSFPKPGT
VITPEVQARSMRPVAASRDEASSRVAMGRAPAPVPDERQRLHGGGMAEAG
RDLVVPERKKASVDAALREAPPCHPPAAERSGALSEATVIKTGQERRDVR
RVNGDSDRRSLGCNNPTIASANSSFSTVLAGHDHAHFQLASPVPEQE*

mRNA from alignment at Ecto-sp9_F_contig1087:17838..23695-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig1087.759.1 ID=mRNA_Ecto-sp9_F_contig1087.759.1|Name=mRNA_Ecto-sp9_F_contig1087.759.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5858bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1087:17838..23695- (Ectocarpus species9 EcSCA_722f female)
ATGGGACAGGCCGCGAGTTGCTGTTCGTTCTGCTGCCCTTGCCCATTGAG
GAGAAAGGCTGCAGCGGTACCAGGAGCAACAACCGAAGACCAATCAAAGT
TGCTCCCGTCGTCGTCGACGAAGAAGGCACACAAGCCACGAAAGGAGAAA
TGTTCGAAGTATCGACGACCACCTTCTCATCTGAGAGAGTTGTCGGGTGA
CATGTGAGCTTCGTTTTGTGCTGGGAGGGTTCACCTTTTGGAGTCGAGCC
GTATTTTACGCACGGCTCGTATGTATCTCATTGGTCGTAGCTTGCGCTGT
TTGCGCCGTACGGAATATTGGTGCCGTTTGCGCCGTACGGAATATTGGTG
CCGTTCGCACGTGCATCTTGGATGGACAGGCATAATAGCACTTCGAACTG
AATGACAATAACCGGTGATCACTGTCCGCGCGGTCTTCATAGTGGAACAT
TGCAGGCTGTCCACCACTACTACAATATAGCACGGACAGCAACAGGCTTG
TTTGCTTCAGCGTTGTTGTGATGAGCGGGATGTCGCGACCAAGTTCTTCC
ACAAATCTGGGTCGCTACACTATCGGCAATGAACCCAGCTAAAATGGCTA
CATGTTGTATCAGTACAGTGTTAAACGCCACCATGGTCTTACGCTCGTGG
AAATTATTGTCAAGGCGACCCAATTCCAATGTGCTTACGTATGCGTGCGA
TCTCCTTGATTAAGACGTAAGCACCAGGTCCATGTTCATTGAGAGTGAAG
ACTCCGTTGTATATTTCCCGACTTGGGGTATGTATGTATCCCAAATCGTC
CCGTCATTTGCCGCTATGCTCATTAAGTAAGAATCCAAATGTATTTCTAT
GCAGTGTACTCAGATGTGTCGGTGACTCTTGTAGATTCCAGGCAGTAAGC
AGTAGGTTTTGTACATTACTCCATGATGGCCAGAGACGTACACTGCAGTT
CCGGCACAAACCCAATTGCACTTCCGTCGCCCTGTTCTACCCCATCCCAC
CAGTCGCGAGCCAGAACTCTGCTCGTTGCGTCCGTAACCGATGTTCACTT
TACGCGCGTGCGCCGTCACTTTTGTTGGCCTCTTTTGACGGGCGAAAAGA
AATCAAGTCGTCAGATTGGTGCTCGTGGGTGGATGCGACACGGGGAAGAC
ATGCCTGCTACGGCGTTTTCTCGGCGGCTATTTCGACGACATTGGACACC
AAGACTACACGAGGCAAGCGCAGGCAATGTTGATTAAATGTGCTGCAAAG
CCATTCGTGTTACTTGTATACTCGACGACACCACCGTAATGTGGCGTGTG
CACGATCAAGTTGATGGGCGAGCAAGATAATTTCCTACTGCTCACAGGTT
TACAACGACAGTATCTCTGCAAAACCAGATCCTCTGTCTTTCTCGTTCTC
TTGTGCTCGTGCCGTCTCATCGTGCGTGGCTACTCTTGGGCGTGTTACCA
GAACGCTGGGGGTGGATTTCGGATGCAGGACCGTGGACCTCGCTGACCGT
CGAGTTCGTCTCCAGATGGTGAGGAAGCCAACGCTTCAGAAATTGTCACG
AGAGACCATGCTCGAGGAACCGGAATTGCACTACTGAGAAAACGCCCCGC
GAGGGACGAGAGACCTTCCGCGACCACGCGCCCCACATTGTGGCACGAGA
AAGAAAACCAATTATGAGAGAAAATATGTATCTTCCCCTGCAATGGTTAG
CAGATAGGCCTCGAGACCTACATCCCCTGTGCTGCAGTTGGCGCCCGGAG
ATATGAAACGTCAGCTTCGGGTCGAAACTTATTTTCGTGTTTCTTCCCCA
CCGTGGAGAAAAGCAGGAGGTTGTTTCTTGGCCATTTTTCTCGTTGTTCC
GCGACAATCCATGATCGTGGCTATCCCGACTTCCACGAATCACGCTGAAG
TCACGTTGAGGAAGCAGAATATTAATACGGTGTCGGTGTTGCATGTCTGG
CAACCTGTTGCAGGTTTTGTAAAATTGGGTTCCATTGTTTATCAGTGCGC
GCCGAAGCGTGGTACATGGCGACTTGTATCACTACACTTCTGGGCTTTTG
TCTGCGACGTCGTGGTGATAGTATTGAGCAACCAGAAAAATCGATTGGAG
GCTCCACCTAACATATTGATAGTGCTTTCTGGCAGCAGAGCAGTGTGAAA
CCGTCATCCCCGCGCGAAGGGCAAAATCAAGAACAGGCTAAATATGGAAG
GCTGTCAATGGAGATCAAAGCCACAGTCGCAAACACACCACTGATTACAT
AGGAAGGAAGGGATTTCCATGGAGGCACATGAACATCAGGGAAGTTTAGT
GTCACGGCTATGCCATCGAAACACATGCCATCTCTCTAGGATATTCATTT
CCGTGGGAGTCGCGGGTATTGTCGCTGAAACGGCCGTGGAAGCCGTGGAA
ACTCCCGTTACAGCTCATGGACAAGCCGACAATGGTGTCGAACGTTGCAA
ACCTAACAACTACAACCTAACAACTACGATGTCCCAAGACTACAGTAAGC
TATTCGCGTGGCAACAGCGTTCCATTCTAAGGCAGGTACAGCTTACTACG
CTGTCTCTCTTATATGCATAACCATACGACGTGCATGTCAATTTGATTGC
AAGCGAACAAACGGTGTCGTCCTTTCGAACTCATCGATGACCACCCCATC
AACTGTGCGTGATTGGCTCCCTGCCGTTTACGCGTTTGTCTACCTGCGCC
CGCTGGACATGTATTTCAACCTAAGTGGGATACCGGCGGCAGTGAGACGT
ATCGAAGCGTTGTGTCTCACTACCTCCGAGGAGCCGATGGGGTAATGATG
TGCTTCGATGTCAACAGCAAGGTCGGTCTCCCTTCTTGGTCAAGACGAAT
TAACAAGTTTTCACCGTTATTGTACTAAAAATACCTGCTACCGTAAACGC
AGGGTGTCCCCGAGCAGTAACGAGCACCAGCGTCTTGCATGAGTCGAGGC
GGTGGGCGTTTTACGAACGGAAACGTTGACAAAGCTCTTCCCGGTGGGGA
CAACGCCTTCTGGTGGTCTAAGCGCATGCTCTAGCCGTACCATTGAGTGA
AGTATGTGACCCCCGTAACGTGGGAGAAAAACAGCCCCCGTAATATGGGG
AAAAATCAGCCAGCCTTTTTTTCAGGGGAAATAGGAGCTCTGTGGTCGCC
TCAAACATCTAGTTGTGTTCCACCACAGCATGCACGCTGGTGTATCAAAA
CATTGACGGTAGTGATGTTTCTCTTGCCAACAACAACAACAGGAGACTCT
CCGCTCGCTGAGGTCAACTTGGGCGCCTTTCTTGGACAAACACACTCCAA
GAACCTGTAGGGTCTTGCTCGCTGGAAACAAGGCTGACGCTCGGGGCGAT
TTCAGCGTGAACGGTGGAGAGGTCTCTCGCGAGGATGCAAAGGTACCTAC
TCGTGCAGCGGGTAGCTTTCTTATGCCACGCCCCCCGCTTTGGTATACGG
CACTCTGCCGAATTTATTGCTCATAGGTTTTAGTCATTTTGATGTCGCTT
CTCGTCGAAGACCGGTTGCAACCCTCGACGGATGACAGCCTGTCTAGCTG
TTAAAACTGTTTCTGCGAGCAGTGGACGCCACCTTTGCTGCGTTGCCCAC
CCATCCCTAAGATTGCTGCGAAGTCTGAGGTCAGGTTTCTCTGCGGAATG
CCTGGTGCGCTGTTGGTGACGATGAAAATACATCCCACTCTTCACCAGTT
CTCGGACATGACAACGTGTGTCTGCTACGATTGTGGTGTTCGTTCGTTCT
TGCAAACGCATCTATCGCATCTATGGATCGCAGCGCTTCGCTGAAGCGAT
GGAGGCCCAGGTGTTCGAGACCAGCGCAAAGCTCGGCACCAACGTTGACG
TAGCGGTGATGGCACTCATGCAAGAAGTCTTACACCACCGGCAGTTTGCC
GCGGAGGACAAGGCCAGCTCGAGCAAGAAGGGCTCCAGGTACCGTTGTAC
GGCATGAGAGACGTTAAAAAAAATCCAGCATCGTATTTGCCCTTGGGTAG
TATGGGGAAGAAGTGGACCGTGTCCACGGCTAGTGAGGCACGAATGGCAG
CACATGCTACTGTCGCGCATTTCGTTCCCCCGTGCACCCTGACACATGTC
TTGCTCTCATTTACACTCTGCCACAAGGCAAGAACATTCCCTCACAGGTC
GTTGAACATGAGAAGACTTCAATGTTAAATCGGCAATTGTTTGGGACAAC
ACCTCGCGAGGGATGAGTGTCCCGCGATATTACCGAAGTCACAAGAAGTG
ACGCAAGAAAATTGCATCCGACTACCGCTCGGATAGTTAGCGAGTACTCA
CGTAGTCGTGACATTTCACAACCCTACCCTATGTTGTCTGCCCCCGGCCC
TGGCCATCCGTCCTTGGTCTATTCCAGCCCGGCGCGAAGAGGACGGAAAA
GGCTCTCTGTTTCCCTGAAGGGCGTGATGGAACGCAAAGGCGACCTGGAT
ACCGCTTCCTCATGTGCTGCCCAGAGCGGGATAGGCAGAAGTCCCGCCAA
CGTGAGGCGGGAGGTTAGGGTGTAGGCCGTGGACCAGACGTTTCGTATGT
TCAGATCTCGCTGCGCCGAAAAGTCGATCTATCGCCAGCGACACTAATTC
TGATGTAATCGCGAGTGCGCCCCTAAACCTAAGTGTATTCATGCTGGTGC
CAATCTGAACGACTCTCCGTGGCTATTCAAGATCAGGTGTGCATACGTAC
GGCACCTCTCTCACCTTTCCGAACCCCTTCCCTGTGGTATCTTTATGGCG
GTATCACAGACCTCGTTTGCGTCCGCTCACTTGCGTTATCAACCACTTGC
CGCGACACGAACTCCCGCAAACCATTCGATACGCGTAGGCCCTTTGCGCC
GATGCTACCACCACGGAAGGGACAAGCTCTGTGTACTCCAGTTCAGCCTC
CCACAGAGACGGCGATGGCAGTGACCAAGAAAACAATGGTAGGGATCAAG
AGGACCAAGGCAGGATGTGGTCAATGCTTCCCAGCACCGACGACGGCATC
ATTCTAGGCGACGGTGGGGAAGACCGAGCCGATGATGCTCGTCAGGAGCA
ACAACAATTCAGCGCACTAGACTACAGCATCGACGGCAGGCTTAGTAAAG
CGAGCAGGGACTGCGAGTCGGAGAGTGGTCGGCGCGGTGGAGGAACGCCA
CCACGCGATAGCGCCGGGGACTCGAGCCACAGCGGCTTCAAAAGAGGGGG
GCGCTATCATCTAATCAATAAACTGGTCATTGCTTCACCTTGTTCTCGAG
GAGCGAGAACCGAGGATATCGACGTACATCGGTGTTGTGATCGTGATGAT
CAAAGCGGCGGAGGGTGCCGTCGCCAGCCCAGCCACGTGGAAGAACTCGA
CGGGCACAATCGCGGCACAAAGGCAGACAACCGGAACGTGACCTCTTTCC
CAAAGCCTGGCACCGTCATCACGCCGGAAGTGCAAGCGAGATCGATGAGA
CCCGTGGCTGCTTCTCGCGACGAGGCGTCGTCTCGTGTTGCTATGGGCCG
TGCGCCGGCACCCGTGCCTGACGAGCGGCAGCGGCTACACGGCGGAGGCA
TGGCGGAGGCCGGTCGAGATTTGGTCGTGCCTGAGAGGAAGAAAGCATCG
GTAGACGCCGCCTTGCGCGAGGCGCCACCCTGTCATCCACCCGCTGCAGA
GCGTTCAGGGGCCCTCTCGGAAGCAACCGTAATAAAAACAGGCCAAGAGC
GGCGAGATGTTCGCAGGGTGAATGGTGACAGCGATCGCCGTAGTTTGGGG
TGCAATAACCCTACCATAGCATCCGCCAACTCGTCCTTTTCGACGGTTCT
GGCCGGGCACGACCACGCCCACTTCCAGCTGGCATCTCCTGTCCCGGAAC
AAGAGTAA

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1087:17838..23695-

>mRNA_Ecto-sp9_F_contig1087.759.1 ID=mRNA_Ecto-sp9_F_contig1087.759.1|Name=mRNA_Ecto-sp9_F_contig1087.759.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3888bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1087:17838..23695- (Ectocarpus species9 EcSCA_722f female)
ATGGGACAGGCCGCGAGTTGCTGTTCGTTCTGCTGCCCTTGCCCATTGAG
GAGAAAGGCTGCAGCGGTACCAGGAGCAACAACCGAAGACCAATCAAAGT
TGCTCCCGTCGTCGTCGACGAAGAAGGCACACAAGCCACGAAAGGAGAAA
TGTTCGAAGTATCGACGACCACCTTCTCATCTGAGAGAGTTGTCGGGTGA
CATATGGGACAGGCCGCGAGTTGCTGTTCGTTCTGCTGCCCTTGCCCATT
GAGGAGAAAGGCTGCAGCGGTACCAGGAGCAACAACCGAAGACCAATCAA
AGTTGCTCCCGTCGTCGTCGACGAAGAAGGCACACAAGCCACGAAAGGAG
AAATGTTCGAAGTATCGACGACCACCTTCTCATCTGAGAGAGTTGTCGGG
TGACATAAATCAAGTCGTCAGATTGGTGCTCGTGGGTGGATGCGACACGG
GGAAGACATGCCTGCTACGGCGTTTTCTCGGCGGCTATTTCGACGACATT
GGACACCAAGACTACACGAGGCAAGCGCAGGCAATAAATCAAGTCGTCAG
ATTGGTGCTCGTGGGTGGATGCGACACGGGGAAGACATGCCTGCTACGGC
GTTTTCTCGGCGGCTATTTCGACGACATTGGACACCAAGACTACACGAGG
CAAGCGCAGGCAATAACGCTGGGGGTGGATTTCGGATGCAGGACCGTGGA
CCTCGCTGACCGTCGAGTTCGTCTCCAGATGAACGCTGGGGGTGGATTTC
GGATGCAGGACCGTGGACCTCGCTGACCGTCGAGTTCGTCTCCAGATGTG
GGATACCGGCGGCAGTGAGACGTATCGAAGCGTTGTGTCTCACTACCTCC
GAGGAGCCGATGGGGTAATGATGTGCTTCGATGTCAACAGCAAGTGGGAT
ACCGGCGGCAGTGAGACGTATCGAAGCGTTGTGTCTCACTACCTCCGAGG
AGCCGATGGGGTAATGATGTGCTTCGATGTCAACAGCAAGGAGACTCTCC
GCTCGCTGAGGTCAACTTGGGCGCCTTTCTTGGACAAACACACTCCAAGA
ACCTGTAGGGTCTTGCTCGCTGGAAACAAGGCTGACGCTCGGGGCGATTT
CAGCGTGAACGGTGGAGAGGTCTCTCGCGAGGATGCAAAGGAGACTCTCC
GCTCGCTGAGGTCAACTTGGGCGCCTTTCTTGGACAAACACACTCCAAGA
ACCTGTAGGGTCTTGCTCGCTGGAAACAAGGCTGACGCTCGGGGCGATTT
CAGCGTGAACGGTGGAGAGGTCTCTCGCGAGGATGCAAAGCGCTTCGCTG
AAGCGATGGAGGCCCAGGTGTTCGAGACCAGCGCAAAGCTCGGCACCAAC
GTTGACGTAGCGGTGATGGCACTCATGCAAGAAGTCTTACACCACCGGCA
GTTTGCCGCGGAGGACAAGGCCAGCTCGAGCAAGAAGGGCTCCAGCGCTT
CGCTGAAGCGATGGAGGCCCAGGTGTTCGAGACCAGCGCAAAGCTCGGCA
CCAACGTTGACGTAGCGGTGATGGCACTCATGCAAGAAGTCTTACACCAC
CGGCAGTTTGCCGCGGAGGACAAGGCCAGCTCGAGCAAGAAGGGCTCCAG
CCCGGCGCGAAGAGGACGGAAAAGGCTCTCTGTTTCCCTGAAGGGCGTGA
TGGAACGCAAAGGCGACCTGGATACCGCTTCCTCATGTGCTGCCCAGAGC
GGGATAGGCAGAAGTCCCGCCAACCCCGGCGCGAAGAGGACGGAAAAGGC
TCTCTGTTTCCCTGAAGGGCGTGATGGAACGCAAAGGCGACCTGGATACC
GCTTCCTCATGTGCTGCCCAGAGCGGGATAGGCAGAAGTCCCGCCAACGC
CCTTTGCGCCGATGCTACCACCACGGAAGGGACAAGCTCTGTGTACTCCA
GTTCAGCCTCCCACAGAGACGGCGATGGCAGTGACCAAGAAAACAATGGT
AGGGATCAAGAGGACCAAGGCAGGATGTGGTCAATGCTTCCCAGCACCGA
CGACGGCATCATTCTAGGCGACGGTGGGGAAGACCGAGCCGATGATGCTC
GTCAGGAGCAACAACAATTCAGCGCACTAGACTACAGCATCGACGGCAGG
CTTAGTAAAGCGAGCAGGGACTGCGAGTCGGAGAGTGGTCGGCGCGGTGG
AGGAACGCCACCACGCGATAGCGCCGGGGACTCGAGCCACAGCGGCTTCA
AAAGAGGGGGGCGCTATCATCTAATCAATAAACTGGTCATTGCTTCACCT
TGTTCTCGAGGAGCGAGAACCGAGGATATCGACGTACATCGGTGTTGTGA
TCGTGATGATCAAAGCGGCGGAGGGTGCCGTCGCCAGCCCAGCCACGTGG
AAGAACTCGACGGGCACAATCGCGGCACAAAGGCAGACAACCGGAACGTG
ACCTCTTTCCCAAAGCCTGGCACCGTCATCACGCCGGAAGTGCAAGCGAG
ATCGATGAGACCCGTGGCTGCTTCTCGCGACGAGGCGTCGTCTCGTGTTG
CTATGGGCCGTGCGCCGGCACCCGTGCCTGACGAGCGGCAGCGGCTACAC
GGCGGAGGCATGGCGGAGGCCGGTCGAGATTTGGTCGTGCCTGAGAGGAA
GAAAGCATCGGTAGACGCCGCCTTGCGCGAGGCGCCACCCTGTCATCCAC
CCGCTGCAGAGCGTTCAGGGGCCCTCTCGGAAGCAACCGTAATAAAAACA
GGCCAAGAGCGGCGAGATGTTCGCAGGGTGAATGGTGACAGCGATCGCCG
TAGTTTGGGGTGCAATAACCCTACCATAGCATCCGCCAACTCGTCCTTTT
CGACGGTTCTGGCCGGGCACGACCACGCCCACTTCCAGCTGGCATCTCCT
GTCCCGGAACAAGAGTAAGCCCTTTGCGCCGATGCTACCACCACGGAAGG
GACAAGCTCTGTGTACTCCAGTTCAGCCTCCCACAGAGACGGCGATGGCA
GTGACCAAGAAAACAATGGTAGGGATCAAGAGGACCAAGGCAGGATGTGG
TCAATGCTTCCCAGCACCGACGACGGCATCATTCTAGGCGACGGTGGGGA
AGACCGAGCCGATGATGCTCGTCAGGAGCAACAACAATTCAGCGCACTAG
ACTACAGCATCGACGGCAGGCTTAGTAAAGCGAGCAGGGACTGCGAGTCG
GAGAGTGGTCGGCGCGGTGGAGGAACGCCACCACGCGATAGCGCCGGGGA
CTCGAGCCACAGCGGCTTCAAAAGAGGGGGGCGCTATCATCTAATCAATA
AACTGGTCATTGCTTCACCTTGTTCTCGAGGAGCGAGAACCGAGGATATC
GACGTACATCGGTGTTGTGATCGTGATGATCAAAGCGGCGGAGGGTGCCG
TCGCCAGCCCAGCCACGTGGAAGAACTCGACGGGCACAATCGCGGCACAA
AGGCAGACAACCGGAACGTGACCTCTTTCCCAAAGCCTGGCACCGTCATC
ACGCCGGAAGTGCAAGCGAGATCGATGAGACCCGTGGCTGCTTCTCGCGA
CGAGGCGTCGTCTCGTGTTGCTATGGGCCGTGCGCCGGCACCCGTGCCTG
ACGAGCGGCAGCGGCTACACGGCGGAGGCATGGCGGAGGCCGGTCGAGAT
TTGGTCGTGCCTGAGAGGAAGAAAGCATCGGTAGACGCCGCCTTGCGCGA
GGCGCCACCCTGTCATCCACCCGCTGCAGAGCGTTCAGGGGCCCTCTCGG
AAGCAACCGTAATAAAAACAGGCCAAGAGCGGCGAGATGTTCGCAGGGTG
AATGGTGACAGCGATCGCCGTAGTTTGGGGTGCAATAACCCTACCATAGC
ATCCGCCAACTCGTCCTTTTCGACGGTTCTGGCCGGGCACGACCACGCCC
ACTTCCAGCTGGCATCTCCTGTCCCGGAACAAGAGTAA