prot_Ecto-sp9_F_contig1087.758.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1087.758.1
Unique Nameprot_Ecto-sp9_F_contig1087.758.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length413
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1087.758.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 12..216
e-value: 3.9E-6
score: 27.5
IPR008615FNIPPFAMPF05725FNIPcoord: 155..197
e-value: 1.3E-7
score: 31.7
coord: 331..372
e-value: 2.0E-4
score: 21.4
coord: 287..329
e-value: 8.7E-8
score: 32.2
coord: 111..151
e-value: 1.4E-4
score: 21.9
coord: 45..86
e-value: 2.5E-6
score: 27.5
coord: 199..239
e-value: 4.2E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 281..412
NoneNo IPR availablePANTHERPTHR32134:SF98coord: 9..175
coord: 99..311
coord: 281..412
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 99..311
NoneNo IPR availablePANTHERPTHR32134:SF98coord: 165..357
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 165..357
coord: 9..175
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 36..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1087contigEcto-sp9_F_contig1087:15221..16459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1087.758.1mRNA_Ecto-sp9_F_contig1087.758.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1087 15221..16459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1087.758.1 ID=prot_Ecto-sp9_F_contig1087.758.1|Name=mRNA_Ecto-sp9_F_contig1087.758.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=413bp
FQDPVDGIVWPRELEVLKFGFPFNHPIKNAVWPASLQQLEFGTHFNQPIQ
GVKWPRSLQKLTLPGLFNQPIDRAVFPASLHCLTFGDAFDQRIDTVLWPA
SLKTLILDGSFNQPIHRVWWPAALERLRLSAEFNQPVHDVKWPPSLHELS
FQEAFNQPIDRVKWPASLKRLVFGFDFNQRIDGVVLPASTQEVRFGTNFN
QPIHRLEWPESVQRLTFGIDFNQPIADVVWPASLEQVEFLANLNESITKV
AWPVSLEELKIGWEFNQQASDVAWPPNLQRLTFCGEFDQPVDGVLLPPSL
RKLHFGRYFNQQVDHVVWPVSLQELCFSTGFNREIYNVSWPVSLLRLTFG
MHFNKAIENASWPESLQTLVFGMRFNQSIRDVFWPESLQTIVFGKCFNQP
VKGVRWPASLQHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP