prot_Ecto-sp9_F_contig10844.731.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10844.731.1
Unique Nameprot_Ecto-sp9_F_contig10844.731.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length278
Homology
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Sister (chromatid cohesion complex Cohesin, subunit STAG/IRR1/SCC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R2_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 8.070e-157
Identity = 251/265 (94.72%), Postives = 256/265 (96.60%), Query Frame = 0
Query:   13 IPTSRKAATTSAAEADGEESEGXDGNALXXXXXXXXXXRGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVQLHLTPT 277
            IPTSRKAATTSAAEADGEESEG DGNAL XXXXXXXXXRGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLN +FLACGAPSTEGPYGPPS+VSVIEMDGEQWVELLKVV+EDMQGQPGTKG PSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGL EKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQV+   + T
Sbjct:  166 IPTSRKAATTSAAEADGEESEGEDGNALGXXXXXXXXXRGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNFVFLACGAPSTEGPYGPPSDVSVIEMDGEQWVELLKVVIEDMQGQPGTKGAPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLREKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERVFSAT 430          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: SCD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 2.480e-96
Identity = 170/206 (82.52%), Postives = 183/206 (88.83%), Query Frame = 0
Query:   76 VSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNY----CEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVQLHLTPT 277
            VSSYK+DSDKAM+ELLN IFLACGAPST GPYGPP++VSVIEMDGEQW ELLKVV+EDMQGQPGTKGVPSFPLAPAAKGKSGK       N       + + L EACRRGDDHDASTLEAVVG+LVAL+SHSASQDIRLAATLAGME+GLGVAE+LAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQV+  L+ T
Sbjct:    3 VSSYKKDSDKAMQELLNFIFLACGAPSTAGPYGPPADVSVIEMDGEQWAELLKVVIEDMQGQPGTKGVPSFPLAPAAKGKSGKVVATSLDNLPVLRTILTSGLVEACRRGDDHDASTLEAVVGVLVALASHSASQDIRLAATLAGMEVGLGVAEDLAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVERILSAT 208          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: SCD (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8S9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 7.750e-11
Identity = 60/218 (27.52%), Postives = 107/218 (49.08%), Query Frame = 0
Query:   57 LMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTL-EAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVQLH 273
            L EA+    T L +++S+W   ++ED++KA +E+LNL+ LACG  S   P   P  ++ ++M+      L+  VVED++   G      +P+    +G      + F+ N+ E +  L + C   +    S +    +  L  LSS S  + IR  +T+A + +   +    A + E+L ++ RQL A  +S G   G + +   RK+  L+    L+
Sbjct:  126 LFEAIKSRKTPLENLLSEWRERFEEDNEKATREVLNLVLLACGGTSPCVPESEP--LAQLDMNMSH---LMDHVVEDLENANG-----EYPIMSRGRG-----TKKFQRNFEEFWEVLVKECYESEILFTSEIANTFIDWLTTLSS-SELRPIRHTSTVAILALSNSLVRTAASISEQLAIATRQLNAETNSPGTTPGSRKSPNIRKVALLKENKVLY 327          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Stromal (antigen 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2Q431_CYPCA)

HSP 1 Score: 64.3 bits (155), Expect = 6.770e-8
Identity = 57/205 (27.80%), Postives = 91/205 (44.39%), Query Frame = 0
Query:   68 LSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVQL 272
            LSSV+ DW+ SYK+D D A+ +L+N      G   T         V +      Q  E+++ + E+     G      +PL  A     G   + FR N+CE    L   C+    +D   ++ V+ +L  LS  S  +  R  +TLA M++   +      L      ++RQ EA ++   K  GK+A EK   +  LE + +L
Sbjct:   90 LSSVIDDWIESYKQDRDLALLDLINFFIHCSGCKGT---------VRIEMFRNMQNAEIIRKMTEEFDEDSG-----DYPLTMA-----GPQWKKFRYNFCEFIMVLVRQCQYSIIYDEYMMDTVISLLTGLSD-SQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERN---KVAGKRANEKLELL--LEKRKEL 269          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Stromal (antigen 1 n=1 Tax=Falco tinnunculus TaxID=100819 RepID=A0A8C4XTJ5_FALTI)

HSP 1 Score: 63.9 bits (154), Expect = 8.460e-8
Identity = 50/180 (27.78%), Postives = 77/180 (42.78%), Query Frame = 0
Query:   64 NDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEA 243
            ND   SSVV DW+ SYK+D D A+ +L+N      G   T         V +      Q  E+++ + E+     G      +PL        G   + FRSN+CE    L   C+    +D   ++ V+ +L  LS  S  +  R  +TLA M++   +      L      ++RQ EA
Sbjct:    2 NDAYSSSVVDDWIESYKQDRDIALLDLINFFIQCSGCRGT---------VRIEMFRNMQNAEIIRKMTEEFDEDSG-----DYPLT-----MPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSD-SQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEA 161          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Stromal (antigen 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2Q3M1_CYPCA)

HSP 1 Score: 63.5 bits (153), Expect = 1.220e-7
Identity = 56/206 (27.18%), Postives = 92/206 (44.66%), Query Frame = 0
Query:   67 ALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGKGGGKKAAEKSRKIQGLESQVQL 272
            ++SSV+ DW+ SYK+D D A+ +L+N      G   T         V +      Q  E+++ + E+     G      +PL  A     G   + FR N+CE    L   C+    +D   ++ V+ +L  LS  S  +  R  +TLA M++   +      L      ++RQ EA ++   K  GK+A EK   +  LE + +L
Sbjct:   91 SVSSVIDDWIESYKQDRDLALLDLINFFIHCSGCKGT---------VRIEMFRNMQNAEIIRKMTEEFDEDSG-----DYPLTMA-----GPQWKKFRYNFCEFIMVLVRQCQYSIIYDEYMMDTVISLLTGLSD-SQVRAFRHTSTLAAMKLMTALVNVALNLSINQDNTQRQYEAERN---KVAGKRANEKLELL--LEKRKEL 271          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Stromal (antigen 1 n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9CZ64_9AVES)

HSP 1 Score: 61.2 bits (147), Expect = 6.880e-7
Identity = 48/175 (27.43%), Postives = 75/175 (42.86%), Query Frame = 0
Query:   69 SSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEA 243
            SSVV DW+ SYK+D D A+ +L+N      G   T         V +      Q  E+++ + E+     G      +PL        G   + FRSN+CE    L   C+    +D   ++ V+ +L  LS  S  +  R  +TLA M++   +      L      ++RQ EA
Sbjct:   23 SSVVDDWIESYKQDRDIALLDLINFFIQCSGCRGT---------VRIEMFRNMQNAEIIRKMTEEFDEDSG-----DYPLT-----MPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSD-SQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEA 177          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: BY (PROTMAP: gi|472587509|gb|EMS25005.1| cohesin complex subunit SA-1/2 [Rhodosporidium toruloides NP11] gi|647398558|emb|CDR42575.1| RHTO0S07e01508g1_1 [Rhodosporidium toruloides] n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CDJ1_RHOTO)

HSP 1 Score: 61.2 bits (147), Expect = 7.320e-7
Identity = 47/149 (31.54%), Postives = 71/149 (47.65%), Query Frame = 0
Query:   54 ENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDD-HDASTLEAVVGMLVALSS 201
            +NGL  AV   +TAL +VV DW+ SYKEDS  AM EL+N +   CG  +T   +       +        VE LK +V++ + +       ++PL   +K K+ K    FRS+  +  ++L       D  +  S  E     + ALSS
Sbjct:  152 DNGLFNAVKDPNTALKTVVEDWIESYKEDSGPAMAELVNFVLRCCGCNATIDEHQAEDENGI--------VENLKDIVDEFKQETNL----AYPLI--SKSKTYKK---FRSSLAQFLSKLVSETAVDDMLYSTSFFEQFQSWVHALSS 283          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: SCD (domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGD9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 9.720e-7
Identity = 52/195 (26.67%), Postives = 90/195 (46.15%), Query Frame = 0
Query:   54 ENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEA-VVGMLVALSSHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSS 247
            E  L EA+ R   +L  +VS W   ++++S+KA KE+LNL+   CG      P   P       +D  +  +L+  V+ED++   G   + S           GK A+ F+ ++   +    + C   +    S +    +  L  LSS S  + IR  +T+A + +   +    A + E+L +++RQL A  SS
Sbjct:  143 EKSLFEAIKRGKVSLDDLVSKWRIRFEKNSEKATKEVLNLVLQTCGGAGQCVPESKP-------LDQLEMGDLVNHVLEDLENVNGEYLISS----------RGKSAKKFQRHFEGFWEAFVKECYESEILLTSDVAYNFIDWLTTLSS-SELRPIRHTSTVAVLALSSALVRTAASISEQLTITKRQLNAETSS 319          
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Match: Cohesin (complex subunit SA-1/2 n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511KHU5_RHOTO)

HSP 1 Score: 60.8 bits (146), Expect = 9.810e-7
Identity = 42/121 (34.71%), Postives = 61/121 (50.41%), Query Frame = 0
Query:   54 ENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGAPSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAPAAKGKSGKPARIFRSNYCEVFNRL 174
            +NGL  AV   +TAL +VV DW+ SYKEDS  AM EL+N I   CG  ST   +       +        VE LK +V++ + +       + PL   +K K+ K    FRS+  +  ++L
Sbjct:  150 DNGLFNAVKDPNTALKTVVEDWIESYKEDSGPAMAELVNFILRCCGCNSTIDEHQAEDENGI--------VENLKDIVDEFKQETNM----AHPLI--SKSKTYKK---FRSSLAQFLSKL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10844.731.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
Sister8.070e-15794.72chromatid cohesion complex Cohesin, subunit STAG/I... [more]
SCD2.480e-9682.52domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
SCD7.750e-1127.52domain-containing protein n=1 Tax=Phytophthora meg... [more]
Stromal6.770e-827.80antigen 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepI... [more]
Stromal8.460e-827.78antigen 1 n=1 Tax=Falco tinnunculus TaxID=100819 R... [more]
Stromal1.220e-727.18antigen 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepI... [more]
Stromal6.880e-727.43antigen 1 n=1 Tax=Anser brachyrhynchus TaxID=13258... [more]
BY7.320e-731.54PROTMAP: gi|472587509|gb|EMS25005.1| cohesin compl... [more]
SCD9.720e-726.67domain-containing protein n=2 Tax=Peronospora effu... [more]
Cohesin9.810e-734.71complex subunit SA-1/2 n=1 Tax=Rhodosporidium toru... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013721STAGPFAMPF08514STAGcoord: 156..257
e-value: 5.5E-8
score: 32.7
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 5..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10844contigEcto-sp9_F_contig10844:138..3598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10844.731.1mRNA_Ecto-sp9_F_contig10844.731.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10844 138..3598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10844.731.1 ID=prot_Ecto-sp9_F_contig10844.731.1|Name=mRNA_Ecto-sp9_F_contig10844.731.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=278bp
QKKARGRKSTGGIPTSRKAATTSAAEADGEESEGEDGNALGGAVGGGMGG
RGAENGLMEAVLRNDTALSSVVSDWVSSYKEDSDKAMKELLNLIFLACGA
PSTEGPYGPPSNVSVIEMDGEQWVELLKVVVEDMQGQPGTKGVPSFPLAP
AAKGKSGKPARIFRSNYCEVFNRLAEACRRGDDHDASTLEAVVGMLVALS
SHSASQDIRLAATLAGMEMGLGVAEELAGLHEKLGLSERQLEAAKSSAGK
GGGKKAAEKSRKIQGLESQVQLHLTPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013721STAG
IPR039662Cohesin_Scc3/SA