prot_Ecto-sp9_F_contig10828.722.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10828.722.1
Unique Nameprot_Ecto-sp9_F_contig10828.722.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length215
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10828.722.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ03_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 5.970e-46
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:  138 QAWGEDIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTMTVMDMGSAHGSTARTAAKEHGCNV 215
            QAWGEDIHIGRYDLLS DELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTMTVMDMGSAHGSTARTAAKEHGCNV
Sbjct:    4 QAWGEDIHIGRYDLLSMDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTMTVMDMGSAHGSTARTAAKEHGCNV 81
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BLAST of mRNA_Ecto-sp9_F_contig10828.722.1 vs.
Match: Probable (glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.330e-44
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0 
Query:  137 MQAWGEDIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETT-MTVMDMGSAHGSTARTAAKEHGCNV 215
            MQAWGEDIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETT MTVMDMGSAHGSTARTAAKEHGCNV
Sbjct:    1 MQAWGEDIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTIMTVMDMGSAHGSTARTAAKEHGCNV 80
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BLAST of mRNA_Ecto-sp9_F_contig10828.722.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT65_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.430e-8
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0 
Query:  121 SSVQGYYDDPNALNFHMQAWGED-IHIGRYDLLSTDELK-MGPRERIKRATALSTRGLLGKV 180
            S+ +GYYD  +A NF+ Q WGED +H+GRYDLLS DE+K +  +E+I+RA  L    L+ K+
Sbjct:  313 SNAKGYYDSDDAQNFYSQIWGEDELHVGRYDLLSEDEIKGLSDQEQIRRAEELHELELVKKI 374
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BLAST of mRNA_Ecto-sp9_F_contig10828.722.1 vs.
Match: S-adenosyl-L-methionine-dependent (methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FYW5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.040e-6
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0 
Query:  121 SSVQGYYDDPNALNFHMQAW-GED--IHIGRYDLLSTDELKMGPRER-IKRATALSTRGLLGKVFPPS-PGGETT--MTVMDMGSAHGSTARTAAKE 210
            S+ +GYYD  +A NF+ + W GED   H+GRYDLL+++E  + P E+ I+RA  L    L+ K+     P  ET   + V+D+G  +GS  R   KE
Sbjct:   31 SNAKGYYDSDDAQNFYNKIWAGEDELFHVGRYDLLTSEEKNVFPIEQQIRRAEELHELELMNKIRHYCLPSSETNFGLRVVDLGCGYGSLLRRLYKE 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10828.722.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized5.970e-4698.72protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Probable3.330e-4498.75glycine-sarcosine methyltransferase n=1 Tax=Ectoca... [more]
Uncharacterized3.430e-850.00protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
S-adenosyl-L-methionine-dependent3.040e-640.21methyltransferase n=1 Tax=Fragilariopsis cylindrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023143Mycolic acid cyclopropane synthase-like domain superfamilyGENE3D1.10.287.840coord: 117..175
e-value: 4.9E-6
score: 28.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10828contigEcto-sp9_F_contig10828:520..4058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10828.722.1mRNA_Ecto-sp9_F_contig10828.722.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10828 520..4058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10828.722.1 ID=prot_Ecto-sp9_F_contig10828.722.1|Name=mRNA_Ecto-sp9_F_contig10828.722.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=215bp
MRAHVAKCIKMAHRRSALDASRFALGGSGRLWSLQRLQRKSTDLRQRYPT
SAFAATTGTSQGSVMSRSGRVEYPPRGRSHMVASAVSSGGMAFFPKCLQS
SNTGCKAFSAAAGDSVEDIVSSVQGYYDDPNALNFHMQAWGEDIHIGRYD
LLSTDELKMGPRERIKRATALSTRGLLGKVFPPSPGGETTMTVMDMGSAH
GSTARTAAKEHGCNV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023143Cyclopro_synthase-like_dom_sf