prot_Ecto-sp9_F_contig1082.719.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1082.719.1
Unique Nameprot_Ecto-sp9_F_contig1082.719.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length223
Homology
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM38_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 2.820e-139
Identity = 196/241 (81.33%), Postives = 209/241 (86.72%), Query Frame = 0
Query:    1 MHCRSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQ------------------VIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELASS 223
            MHC SLRRSITTG PCMTQDGG+ESTVHVDVEDHKVD HPIRIFDCAGQ                  ++YYGLLQLFLTPRAVYLLVWDAAKASEM GL+LEDLAIAPWLRYLTFRVPDANV+LVGNKWDRVVRAR TVADDVERESR++LKSW+EKAHGHQPH LSLE+GVSLV+CA  S LGV AP FG  TGWPCDKSTPGLFHRMI++PVDDKRTVTMHLPPSY +ALEMLEELASS
Sbjct:    1 MHCLSLRRSITTGKPCMTQDGGLESTVHVDVEDHKVDGHPIRIFDCAGQSYAPLDVSVIPHVDHCRQIVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRARCTVADDVERESRRFLKSWMEKAHGHQPHRLSLENGVSLVTCAQ-SDLGVSAPAFGGGTGWPCDKSTPGLFHRMIYNPVDDKRTVTMHLPPSYHVALEMLEELASS 240          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 418 bits (1074), Expect = 5.930e-135
Identity = 201/219 (91.78%), Postives = 208/219 (94.98%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELASS 223
            SLRRSITTGGPCMTQ+GGVESTVHVDVEDHKVD HPIRIFDCAGQV+YYGLLQLFLTPRAVYLLVWDAAKASEM GL+LEDLAIAPWLRYLTFRVPDANV+LVGNKWDRVVR R TVADDVE ESR+WLKSW+EKAHGHQPHGLSLEDGVSLVSCA  SGLGV AP FG  TGWPCDKSTPGLFHRMI+DPVDDKRTVTMHLPPSYRLALEMLEELASS
Sbjct:  556 SLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQ-SGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASS 773          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 1.250e-133
Identity = 199/219 (90.87%), Postives = 207/219 (94.52%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELASS 223
            SLRRSITTGGPCMTQ+GGVESTVHVDVEDHKVD HPIRIFDCAGQV+YYGLLQLFLTPRAVYLLVWDAAKASEM GL+LEDLAIAPWLRYLTFRVP+ANV+LVGNKWDRVVR R TVADDVE ESR+WLKSW+EKAHGHQPHGLSLEDGVSLVSCA  S LGV AP FG  TGWPCDKSTPGLFHRMI+DPVDDKRTVTMHLPPSYRLALEMLEELASS
Sbjct:  463 SLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQ-SCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASS 680          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 2.570e-114
Identity = 177/219 (80.82%), Postives = 193/219 (88.13%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRT-VADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELAS 222
            SLRRSI TG PCMT+ GG ESTVHVDVEDH +D HPIR+FDCAGQV+YYGLLQLFLTPRAVYLLVWDAAKASEM GL+LEDLAIAPWLR+LTFRVPDA+V+LVGNK DRVVR RRT VA DVE ESRQWL+SW+E A GHQP G+SLEDGVSLVSCA  SG+G  AP+FG R+GWPCDKSTPGLFHR+I+D  DD R VTM LP SYRLALEMLEELAS
Sbjct:  391 SLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAA-SGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELAS 608          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 1.970e-105
Identity = 163/217 (75.12%), Postives = 184/217 (84.79%), Query Frame = 0
Query:    7 RRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTV-ADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELAS 222
            + SI TG PCMT+  GVESTVHVDVEDH+VD HPIR+FDCAGQV+YYGLLQLFLTPRAVY+LVWDAAKASEM GL+LEDL IAPWLRYLTFRVPDA+V+LVGNK D VVR RRTV A DVE ESRQWL+S +E A GHQP G+SLEDGVSLVSCA  SG+GV AP+FG  +GWP DK+TPGL+ R+ ++     R VTMHLP SYRLAL+MLEELAS
Sbjct:  103 KTSIKTGRPCMTRGCGVESTVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLNLEDLGIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTVVAADVEHESRQWLESLIEIARGHQPRGISLEDGVSLVSCAA-SGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELAS 318          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 2.500e-98
Identity = 159/228 (69.74%), Postives = 176/228 (77.19%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDC-------HPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPG---LFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELAS 222
            SLR SI  G PCMT+ GGV+STVHVDV+DH +D        HPIRIFDCAGQ  YYGLLQLFLTPRAVYLLVWDA KAS+M  L+LEDLAIAPWLR +TFRVPDANVVLVGNKWD V  A   VADDVER+SR+WL +W+E AH HQP  LSLE GVSLVSCAP SG    AP+FG R  WPCDK+ PG   LF R+I++PVDD R VTM L P Y LAL +LEELAS
Sbjct:   83 SLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADDVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAP-SGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELAS 309          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: G (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.170e-87
Identity = 161/305 (52.79%), Postives = 177/305 (58.03%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQ--------------------------------------------------------------------------------------VIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELASS 223
            SLRRSITTG PCMT+D GVESTVHV+VEDHKVD  PIRIFDCAGQ                                                                                      V+YYGLLQ FLTPRAVYLLVWD AKASEM GL+LEDLAIAP LR LTFRVPDAN+VLVGNK DRV +ARRTVADD+E ESRQWL                     +LVSC+P SGLG+ AP+FG RT WPC KSTP LFHR+I +PVDDKR VTMH+PP Y++ALEMLEELASS
Sbjct:   50 SLRRSITTGKPCMTRDSGVESTVHVNVEDHKVDGRPIRIFDCAGQAVKTWLSVEDDPEVLEEEIAMELQAVDEQLAGVTLDDDVPSEEEDDDGMYPVILHPVAQFTLFDTMFQSSAPLQVSVLPHVDHCRQVVYYGLLQQFLTPRAVYLLVWDTAKASEMNGLNLEDLAIAPRLRCLTFRVPDANMVLVGNKLDRVAKARRTVADDLESESRQWL---------------------NLVSCSP-SGLGILAPSFGARTDWPCGKSTPELFHRIIFNPVDDKRAVTMHIPPGYQVALEMLEELASS 332          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ5_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.010e-51
Identity = 96/160 (60.00%), Postives = 108/160 (67.50%), Query Frame = 0
Query:    7 RRSITTGGPCMTQDGGVESTVHVDVEDHKVDC-------HPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWD---------RVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSL 150
            + SI  G PCMT+ GGV+STVHVDVEDH +D        HPIRIFDCAGQ  YYGLLQLFLTPRAVYLLVWDA KAS+M  L+LEDLAIAPWLR +TFRVPDANVVLVGNKWD         RV++A      D E    Q  K + + A      G +L
Sbjct:  247 KTSIKAGKPCMTRGGGVDSTVHVDVEDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAPWLRQMTFRVPDANVVLVGNKWDXPRHEDKSMRVLKANVVEYSDTEFSDAQLRKQFADNAKRMARQGRAL 406          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 2.040e-44
Identity = 106/231 (45.89%), Postives = 130/231 (56.28%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWD----AAKASEMAGLHLEDLAIAPWLRYLTFRVPDANVVLVGNKWDRV-------VRARRT-VADDVERESRQWLKSWL-EKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDK-RTVTMHLPPSYRLALEMLEELA 221
            SLR+SI  G    T++ G ESTVH+DVEDH++D  PIRIFDCAGQV Y GLLQLFLTP+ ++LLV D               LEDL    W+R L+FRVP A V+LVG K DRV         AR +  A  VE   R W+  W  ++ H H    ++ E+GVSLV+C    GL    P      GWPCD S P L HR+     D K R V   LP S+  AL +L+E A
Sbjct:  382 SLRQSIVAGKARPTRNHGGESTVHIDVEDHELDGRPIRIFDCAGQVAYTGLLQLFLTPQVIHLLVVDMPSVVGNIENGTSNPLEDLGALRWVRSLSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQRLHNHHAQSIAFENGVSLVNC----GL----PCDELDGGWPCDVSQPSLLHRITFK--DGKARGVDADLPLSWGCALSLLDETA 602          
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 4.190e-38
Identity = 93/243 (38.27%), Postives = 131/243 (53.91%), Query Frame = 0
Query:    5 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQVIYYGLLQLFLTPRAVYLLVWDAAKASEMAG--LH----------LEDLAIAPWLRYLTFRVPDANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSLEDGVSLVSCAPPSGLGVRAPTFGWRTG------WPCD-------KSTPGLFHRMIHDPVDDKRTVTMHLPPSYRLALEMLEELAS 222
            SLR+S+ TG P  T  G  ESTV +DVE   V+   +R++DCAGQV Y GLLQ+FL+PRAV LLV D     +  G  +H          L++L +  WLR L+FR+PD++VV+V  K D         A  +E    +WL+SW     G   + + +EDGVSL SC PP+         G R        W CD       +S P L HR++++   + R  ++ LP S+ +ALE+L+ L S
Sbjct:  299 SLRQSLRTGRPTPTS-GSEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESWS----GAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGS 536          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1082.719.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.820e-13981.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LRR-GTPase5.930e-13591.78of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
LRR-GTPase1.250e-13390.87of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
LRR-GTPase2.570e-11480.82of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized1.970e-10575.12protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.500e-9869.74protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
G2.170e-8752.79domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.010e-5160.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LRR-GTPase2.040e-4445.89of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
LRR-GTPase4.190e-3838.27of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 32..112
e-value: 7.9E-9
score: 35.8
NoneNo IPR availableGENE3D3.40.50.300coord: 5..149
e-value: 6.6E-14
score: 53.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1082contigEcto-sp9_F_contig1082:24960..26171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1082.719.1mRNA_Ecto-sp9_F_contig1082.719.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1082 24960..26171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1082.719.1 ID=prot_Ecto-sp9_F_contig1082.719.1|Name=mRNA_Ecto-sp9_F_contig1082.719.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=223bp
MHCRSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDCHPIRIFDCAGQV
IYYGLLQLFLTPRAVYLLVWDAAKASEMAGLHLEDLAIAPWLRYLTFRVP
DANVVLVGNKWDRVVRARRTVADDVERESRQWLKSWLEKAHGHQPHGLSL
EDGVSLVSCAPPSGLGVRAPTFGWRTGWPCDKSTPGLFHRMIHDPVDDKR
TVTMHLPPSYRLALEMLEELASS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase