prot_Ecto-sp9_F_contig1080.708.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1080.708.1
Unique Nameprot_Ecto-sp9_F_contig1080.708.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length207
Homology
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 2.690e-122
Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0
Query:    4 LKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLMVK 206
            LKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEV+GGFYALMALWRSVEDLSGDNQLEASTYGAT+KPSEESEASEDVAYLTWAVGRLFELQGK AEAE LYD+CQA+ E+ALGPEHPSVATTLH RAGLMVK
Sbjct:  493 LKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLMVK 695          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 9.110e-50
Identity = 110/232 (47.41%), Postives = 140/232 (60.34%), Query Frame = 0
Query:    1 FRELKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLK-ERVRLVTCRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQ-----------------------------GKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAG 202
            F  L   A+ RFR+LGVLA GA AP++M+++LW+    +S L +  LVDKSLV+  EH Y LHDLVL F K +L  LK ERV LVT R AQYL R+SV+++YA+A E+ GG +ALM LW SVE+LS DN L+ + YG  +   E  EA+ D A    AVG LF LQ                             GK A+AE L ++  A+ EK LGPEHP VA +L+NRAG
Sbjct:  209 FSALDADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELSRDNTLQTTMYGKILSELEACEATADTAISYGAVGNLFFLQVRATRNFLLVSSVSSSRAVPSQTPLLAVRGKYADAEPLCERSPAIREKVLGPEHPDVAQSLNNRAG 440          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 4.160e-42
Identity = 94/192 (48.96%), Postives = 123/192 (64.06%), Query Frame = 0
Query:   14 KLGVLAKGARAPVDMVAHLWELDHDDSTLL-LDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRA 201
            K+ VLA GA AP++M+ +LWE++  + T    + LV K L++ V    Y +HDLVL+F K  +R  +E V   T  QAQYLGR+ V+K Y       G  G + L ALWRSVE LSGD +LE ++Y A++   E  EA+EDVA     VG LF +QGK  EAE LY + QA+ EK LGPEHP VAT+L+NRA
Sbjct:  279 KMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.810e-42
Identity = 96/199 (48.24%), Postives = 128/199 (64.32%), Query Frame = 0
Query:   12 FRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDD---LVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVGG--FYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLM 204
            F K+ VLA GA AP++M+ +LWE++  + T   DD   LV K L+  V    Y +HDLVL+FAK  +R  +E V+  T  QAQYLGR+ V++ Y       GG   + L ALWRSVE LSGD +LE ++Y  ++   E  EA++ VA   W+VG LF +QGK AEAE LY++  A+ EK LGPEHP VAT+L NRA L+
Sbjct:  536 FLKMAVLAAGALAPIEMLRNLWEVEDAEGTR--DDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 9.850e-41
Identity = 91/197 (46.19%), Postives = 129/197 (65.48%), Query Frame = 0
Query:   12 FRKLGVLAKGARAPVDMVAHLWELDHDDSTL-LLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLM 204
            F ++ VLA GA AP++M+ +LWE++  + T    + LV+K L+  V +  Y +HD+VL+FAK  +R  +E V   T  QAQ+LGR+ V+K Y       G  G + L +LWRSVE LSGD +LE +TY A+++  E  +A+ED+A    AVG LF+ Q K  EAE L+++ QAM EK LGPEHP VA +L+NRA L+
Sbjct:  494 FLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.140e-37
Identity = 90/195 (46.15%), Postives = 122/195 (62.56%), Query Frame = 0
Query:   12 FRKLGVLAKGARAPVDMVAHLWELDHDDSTLL-LDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAG 202
            F  + VLA GA AP++M+++LWE++  + T    + LV K L+  V    Y +HDLVLDFAK  +R  +E V+  T  QAQYLGR+ VV+ Y       G  G + L ALWRSVE LSGD QLE ++Y A++   E  EA+E  A   ++VG LF +QGK  +AE+LY +  A  EK LG EHP VA +L++ AG
Sbjct:  320 FLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQGKYDDAESLYKRSLATQEKVLGQEHPDVAQSLNDLAG 514          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.040e-35
Identity = 88/190 (46.32%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   22 ARAPVDMVAHLWELDHDDSTL-LLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVGG--FYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLMVKQ 207
            A AP++M+ +LWE++  + T    + LV K L+  V    Y +HDLVL++AK  +R   E VR VT  QA +LGR+ V+K Y       G    + L ALWRSVE LSGD +LE +         E  EA+E VA   W+VG LF +QGK AEAE LY++ QA+ E  LGPEHP V T+L+NRA L+ KQ
Sbjct:  521 ALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVAL--------ESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.590e-32
Identity = 83/204 (40.69%), Postives = 120/204 (58.82%), Query Frame = 0
Query:    1 FRELKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLL-LDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYA--KAGEVVGGFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNR 200
            F  L    R  F ++ VLA GA AP +M+ +LWE+   + T    + LV+K L++ V+   Y +HDL+L + + ++++  ERV+  T  QAQYLGR+ VV  Y   K G    G + L  LWR +E LSGD  LE ++Y A +   +  EA+ +VA     V  L+++QGK AEAE LY++ Q + EK LG EH  VA  L+NR
Sbjct:  502 FNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQGKFAEAEPLYERSQTILEKVLGSEHSDVAKALNNR 705          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 5.050e-30
Identity = 80/194 (41.24%), Postives = 114/194 (58.76%), Query Frame = 0
Query:   15 LGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWA-VGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLMVKQ 207
            L VLA G  AP DM+  LW+     +      LVD+S+++    A+ +HDLVL F K +L+    R  + T R A+YLG++ V++ Y   GE   G YALMALWRSVEDL G++++ A+ Y   ++   E        +  W   GR+ EL GK AEA+ LY +   + E  LGP+HP++AT L+NRAGL+  Q
Sbjct:  471 LAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRP-IATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPE--------HAPWRQAGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLLGSQ 654          
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.360e-25
Identity = 79/200 (39.50%), Postives = 109/200 (54.50%), Query Frame = 0
Query:   12 FRKLGVLAKGARAPVDMVAHLWELDHDDSTLL-LDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASEDVAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNRAGLMVKQ 207
            F+K  VLA GA A  +M+ +LWE +    T    + LV K L++ V    Y +HDLVLDF K +++   E  + +   QAQ+LGR++V+K Y       G  G + L ALWRSVE LSGD +LE  +Y  ++   E  EA+  VA    +VG LF +Q              A+ E+ LGPEH  VA +L NRA L+  Q
Sbjct:  413 FKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQ--------------AIQEQILGPEHLDVAMSLINRAQLLRAQ 598          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1080.708.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
NB-ARC2.690e-12295.57and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC9.110e-5047.41domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC4.160e-4248.96domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC5.810e-4248.24and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC9.850e-4146.19and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC2.140e-3746.15and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC2.040e-3546.32domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC2.590e-3240.69and TPR repeat-containig protein n=1 Tax=Ectocarpu... [more]
NB-ARC5.050e-3041.24and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC2.360e-2539.50domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availablePFAMPF13424TPR_12coord: 156..203
e-value: 9.2E-9
score: 35.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 133..207
e-value: 7.0E-13
score: 50.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 145..204
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..74
e-value: 2.5E-9
score: 39.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1080contigEcto-sp9_F_contig1080:18568..19586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1080.708.1mRNA_Ecto-sp9_F_contig1080.708.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1080 18568..19587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1080.708.1 ID=prot_Ecto-sp9_F_contig1080.708.1|Name=mRNA_Ecto-sp9_F_contig1080.708.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=207bp
FRELKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDK
SLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKD
YAKAGEVVGGFYALMALWRSVEDLSGDNQLEASTYGATMKPSEESEASED
VAYLTWAVGRLFELQGKLAEAEALYDQCQAMYEKALGPEHPSVATTLHNR
AGLMVKQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR036388WH-like_DNA-bd_sf