prot_Ecto-sp9_F_contig108.703.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig108.703.1
Unique Nameprot_Ecto-sp9_F_contig108.703.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length115
Homology
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BLAST of mRNA_Ecto-sp9_F_contig108.703.1 vs.
Match: FirrV-1-A29 (n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM58_9PHYC)

HSP 1 Score: 94.7 bits (234), Expect = 8.200e-23
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 0 
Query:    9 FAMCRDLCSRSQHSRFHHGAVTVLRRGHRVLGKGSNRHNAHAEVSSIKAIPRYQRHDNLVVYVCRVNSSGRFMNSRPCINCLTFMKANHVTRVFFTDGSG-FTKINL 114
            F  C+ L   SQH  F HGA+   R    ++GKGSNR + HAEVS+++ +   Q H  L VYVCRVN+ G+FMNS+PC NC+ +MK   V RV+++D +G F+K+ L
Sbjct:    9 FLECQHLAKFSQHPVFRHGALVTNRTT--IVGKGSNRSSLHAEVSALQNVQGGQ-HMRLRVYVCRVNARGKFMNSKPCQNCMNYMKHRGVYRVYYSDDAGGFSKLVL 112
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig108.703.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
FirrV-1-A298.200e-2347.66n=1 Tax=Feldmannia irregularis virus a TaxID=23199... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 1..113
e-value: 4.3E-11
score: 44.7
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 3..103
e-value: 1.6E-8
score: 34.4
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 4..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig108contigEcto-sp9_F_contig108:40127..40471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig108.703.1mRNA_Ecto-sp9_F_contig108.703.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig108 40127..40471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig108.703.1 ID=prot_Ecto-sp9_F_contig108.703.1|Name=mRNA_Ecto-sp9_F_contig108.703.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=115bp
MKRQHTDYFAMCRDLCSRSQHSRFHHGAVTVLRRGHRVLGKGSNRHNAHA
EVSSIKAIPRYQRHDNLVVYVCRVNSSGRFMNSRPCINCLTFMKANHVTR
VFFTDGSGFTKINL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like