prot_Ecto-sp9_F_contig10766.666.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10766.666.1
Unique Nameprot_Ecto-sp9_F_contig10766.666.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length505
Homology
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ7_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 4.280e-71
Identity = 203/246 (82.52%), Postives = 203/246 (82.52%), Query Frame = 0
Query:  260 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GQQTPGAAAXXXXXXXXXXTATQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXFGATPAXXXXXXXXXXPAAAAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 504
            GPGDYR QVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPF TPSKPAAAGASAAGNLFGSAA              XXXXXXXXXXXXXXX         GQQTP AAA XXXXXXXXX   QVSSTPSPFGAPAA A    XXXX  XXXXXX GATPA XXXXXXXXX    AAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT
Sbjct:   28 GPGDYRGQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFTTPSKPAAAGASAAGNLFGSAAAAATPSPFGAGVGFXXXXXXXXXXXXXXXQSPAAPSPFGQQTPAAAAPXXXXXXXXXXXXQVSSTPSPFGAPAATAXXXXXXXXAAXXXXXXXGATPAAXXXXXXXXXXXXXAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 273          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC0_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 5.020e-64
Identity = 189/245 (77.14%), Postives = 192/245 (78.37%), Query Frame = 0
Query:  260 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQTPGAAAXXXXXXXXXXTATQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXFGATPAXXXXXXXXXXPAAAAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 504
            GPGDYRAQVLEIYNKYNPSKLGEVD ILKKYAGREA LIEKLKKKYNVPAGATGAAGAASPF TPSKPAAAGASAAGNLF SA                                      GQQTP A  XXXXXXXXX ++TQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXX GATPAXXXXXXXXXX      XXXXXXXXXXAPAGRGDPA+LRAWMQEVYTKFKPENVPKIDRLLVKYT
Sbjct: 2257 GPGDYRAQVLEIYNKYNPSKLGEVDAILKKYAGREANLIEKLKKKYNVPAGATGAAGAASPFTTPSKPAAAGASAAGNLFRSAVATPSPFGAGFGAAKPAFGGGGGFAAPSPF--------GQQTPAAXXXXXXXXXXXASSTQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXXGATPAXXXXXXXXXXXXX---XXXXXXXXXXAPAGRGDPALLRAWMQEVYTKFKPENVPKIDRLLVKYT 2490          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: mRNA (export factor GLE1 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMR4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.310e-10
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0
Query:  260 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPA 328
            G GD R+QV+ IY K NP+KLGEVD +L KYAGREA LI +L+KKY    G  GA  AA+P  TP+ PA
Sbjct:  307 GGGDARSQVVAIYEKCNPTKLGEVDNLLAKYAGREAELIARLQKKYAAQLGGFGAP-AATPVTTPAAPA 374          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYH6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.640e-7
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  258 AAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATG 313
            AAG GD R++V+EIY K NP+KLGEVD +L KYAGREA L+ +L+KKY    G  G
Sbjct:  347 AAG-GDARSKVVEIYQKCNPTKLGEVDKLLAKYAGREAELVARLQKKYAAQLGNAG 401          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WV03_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.510e-7
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  258 AAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATG 313
            AAG GD R++V+EIY K NP+KLGEVD +L KYAGREA L+ +L+KKY    G  G
Sbjct: 1378 AAG-GDARSKVVEIYQKCNPTKLGEVDKLLAKYAGREAELVARLQKKYAAQLGNAG 1432          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.250e-6
Identity = 49/65 (75.38%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    9 YPPMAATAPSVFGGAQKTPTPAGAPAAPXXXXXXXXXXXXXXXKPAKPAGGTSSFPPMASAAPSV 73
            YPPMAATAPSVFGGA+KTPTPA AP   XXXXXXXXXXX    KPAKPAGGTS F PM   A +V
Sbjct: 2156 YPPMAATAPSVFGGAKKTPTPAAAPXXXXXXXXXXXXXXAAAAKPAKPAGGTSRFQPMKKKAQTV 2220          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4U1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.140e-5
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  260 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAA 329
            G  DYR+Q++  Y  YNPSKL  VD+ LKK+AGRE TL++KL  KY   A A  AA A S     S P A
Sbjct:  271 GVCDYRSQLVAFYKLYNPSKLDTVDSTLKKFAGREETLLKKLHDKYAPQAKAADAAPAPSGSTNKSVPQA 340          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5Q8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.780e-5
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  260 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAA 329
            G  DYR+Q++  Y  YNPSKL  VD+ LKK+AGRE TL++KL  KY   A A  AA A S     S P A
Sbjct:  641 GVCDYRSQLVAFYKLYNPSKLDTVDSTLKKFAGREETLLKKLHDKYAPQAKAADAAPAPSGSTNKSVPQA 710          
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Aste57867_3967 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KF41_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.830e-5
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  264 YRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKY 305
            YR+Q+++ Y +YNPSKL EVDTIL++Y   E  L  +LKKKY
Sbjct:  135 YRSQLVDFYKQYNPSKLNEVDTILRRYRFHEEVLFTRLKKKY 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Uncharacterized4.280e-7182.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.020e-6477.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
mRNA7.310e-1059.42export factor GLE1 n=2 Tax=Pelagomonas calceolata ... [more]
Hypothetical2.640e-760.71protein (Fragment) n=1 Tax=Pelagomonas calceolata ... [more]
Hypothetical4.510e-760.71protein n=3 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized3.250e-675.38protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.140e-551.43protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Conserved1.780e-551.43oligomeric Golgi complex subunit 3 n=1 Tax=Dictyoc... [more]
Aste57867_39679.830e-557.14protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10766contigEcto-sp9_F_contig10766:1785..4272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10766.666.1mRNA_Ecto-sp9_F_contig10766.666.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10766 1785..4272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10766.666.1 ID=prot_Ecto-sp9_F_contig10766.666.1|Name=mRNA_Ecto-sp9_F_contig10766.666.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=505bp
ATKGSSSSYPPMAATAPSVFGGAQKTPTPAGAPAAPATAPVSAAAAPAAA
AKPAKPAGGTSSFPPMASAAPSVFGSAKSSSAAAAAPAPGKTAASTTAAP
ATTALATAAAAAAAAPLPTPFGAGSGFGVAKPSPFGGAGKGAGIFGGGGS
LSAATSAATATAAAAPATSTATTATTAAAAAPAAGATTAGAAPATTGFAG
LSTLSSAAASTSGAAAAAAPAPAASSFGGAFGMGGFGAALGAAAATTTPA
PAAAAAAAAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEK
LKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAAAAATPS
PFGAGAGFGAAKPAAFGGGGFGQATAPSPFGQQTPGAAAPAPAAFGFGAT
ATQVSSTPSPFGAPAAAAAPTASPFGAAAPAPSPFGATPAAAPAASPFGA
PAAAAAAAPGASPFAAAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLL
VKYT*
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