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Homology
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ7_ECTSI) HSP 1 Score: 240 bits (612), Expect = 4.280e-71 Identity = 203/246 (82.52%), Postives = 203/246 (82.52%), Query Frame = 1
Query: 778 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GQQTPGAAAXXXXXXXXXXTATQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXFGATPAXXXXXXXXXXPAAAAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 1512
GPGDYR QVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPF TPSKPAAAGASAAGNLFGSAA XXXXXXXXXXXXXXX GQQTP AAA XXXXXXXXX QVSSTPSPFGAPAA A XXXX XXXXXX GATPA XXXXXXXXX AAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT
Sbjct: 28 GPGDYRGQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFTTPSKPAAAGASAAGNLFGSAAAAATPSPFGAGVGFXXXXXXXXXXXXXXXQSPAAPSPFGQQTPAAAAPXXXXXXXXXXXXQVSSTPSPFGAPAATAXXXXXXXXAAXXXXXXXGATPAAXXXXXXXXXXXXXAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 273
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC0_9PHAE) HSP 1 Score: 236 bits (602), Expect = 5.020e-64 Identity = 189/245 (77.14%), Postives = 192/245 (78.37%), Query Frame = 1
Query: 778 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQTPGAAAXXXXXXXXXXTATQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXFGATPAXXXXXXXXXXPAAAAAXXXXXXXXXXAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLLVKYT 1512
GPGDYRAQVLEIYNKYNPSKLGEVD ILKKYAGREA LIEKLKKKYNVPAGATGAAGAASPF TPSKPAAAGASAAGNLF SA GQQTP A XXXXXXXXX ++TQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXX GATPAXXXXXXXXXX XXXXXXXXXXAPAGRGDPA+LRAWMQEVYTKFKPENVPKIDRLLVKYT
Sbjct: 2257 GPGDYRAQVLEIYNKYNPSKLGEVDAILKKYAGREANLIEKLKKKYNVPAGATGAAGAASPFTTPSKPAAAGASAAGNLFRSAVATPSPFGAGFGAAKPAFGGGGGFAAPSPF--------GQQTPAAXXXXXXXXXXXASSTQVSSTPSPFGAPAAAAAPTAXXXXXXXXXXXXXGATPAXXXXXXXXXXXXX---XXXXXXXXXXAPAGRGDPALLRAWMQEVYTKFKPENVPKIDRLLVKYT 2490
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: mRNA (export factor GLE1 n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMR4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 7.310e-10 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 778 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPA 984
G GD R+QV+ IY K NP+KLGEVD +L KYAGREA LI +L+KKY G GA AA+P TP+ PA
Sbjct: 307 GGGDARSQVVAIYEKCNPTKLGEVDNLLAKYAGREAELIARLQKKYAAQLGGFGAP-AATPVTTPAAPA 374
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYH6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.640e-7 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 772 AAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATG 939
AAG GD R++V+EIY K NP+KLGEVD +L KYAGREA L+ +L+KKY G G
Sbjct: 347 AAG-GDARSKVVEIYQKCNPTKLGEVDKLLAKYAGREAELVARLQKKYAAQLGNAG 401
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WV03_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.510e-7 Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 772 AAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATG 939
AAG GD R++V+EIY K NP+KLGEVD +L KYAGREA L+ +L+KKY G G
Sbjct: 1378 AAG-GDARSKVVEIYQKCNPTKLGEVDKLLAKYAGREAELVARLQKKYAAQLGNAG 1432
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 3.250e-6 Identity = 49/65 (75.38%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 25 YPPMAATAPSVFGGAQKTPTPAGAPAAPXXXXXXXXXXXXXXXKPAKPAGGTSSFPPMASAAPSV 219
YPPMAATAPSVFGGA+KTPTPA AP XXXXXXXXXXX KPAKPAGGTS F PM A +V
Sbjct: 2156 YPPMAATAPSVFGGAKKTPTPAAAPXXXXXXXXXXXXXXAAAAKPAKPAGGTSRFQPMKKKAQTV 2220
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4U1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.140e-5 Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 778 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAA 987
G DYR+Q++ Y YNPSKL VD+ LKK+AGRE TL++KL KY A A AA A S S P A
Sbjct: 271 GVCDYRSQLVAFYKLYNPSKLDTVDSTLKKFAGREETLLKKLHDKYAPQAKAADAAPAPSGSTNKSVPQA 340
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5Q8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.780e-5 Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 778 GPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKYNVPAGATGAAGAASPFITPSKPAA 987
G DYR+Q++ Y YNPSKL VD+ LKK+AGRE TL++KL KY A A AA A S S P A
Sbjct: 641 GVCDYRSQLVAFYKLYNPSKLDTVDSTLKKFAGREETLLKKLHDKYAPQAKAADAAPAPSGSTNKSVPQA 710
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Match: Aste57867_3967 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KF41_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 9.830e-5 Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 790 YRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEKLKKKY 915
YR+Q+++ Y +YNPSKL EVDTIL++Y E L +LKKKY
Sbjct: 135 YRSQLVDFYKQYNPSKLNEVDTILRRYRFHEEVLFTRLKKKY 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10766.666.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 4.280e-71 | 82.52 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 5.020e-64 | 77.14 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| mRNA | 7.310e-10 | 59.42 | export factor GLE1 n=2 Tax=Pelagomonas calceolata ... | [more] |
| Hypothetical | 2.640e-7 | 60.71 | protein (Fragment) n=1 Tax=Pelagomonas calceolata ... | [more] |
| Hypothetical | 4.510e-7 | 60.71 | protein n=3 Tax=Pelagomonas calceolata TaxID=35677... | [more] |
| Uncharacterized | 3.250e-6 | 75.38 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Hypothetical | 1.140e-5 | 51.43 | protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... | [more] |
| Conserved | 1.780e-5 | 51.43 | oligomeric Golgi complex subunit 3 n=1 Tax=Dictyoc... | [more] |
| Aste57867_3967 | 9.830e-5 | 57.14 | protein n=1 Tax=Aphanomyces stellatus TaxID=120398... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 70.9 |
| Seed ortholog evalue | 2e-09 |
| Seed eggNOG ortholog | 157072.XP_008862891.1 |
| Preferred name | NUP159 |
| KEGG ko | ko:K14317,ko:K18462,ko:K18715 |
| KEGG TC | 1.I.1 |
| KEGG Pathway | ko03013,ko04144,ko05169,map03013,map04144,map05169 |
| KEGG Module | M00427 |
| GOs | GO:0000054,GO:0000055,GO:0000056,GO:0000166,GO:0000774,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0006403,GO:0006405,GO:0006406,GO:0006407,GO:0006606,GO:0006607,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010556,GO:0010558,GO:0010605,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016043,GO:0016973,GO:0017038,GO:0017076,GO:0019219,GO:0019222,GO:0022613,GO:0030234,GO:0030554,GO:0031081,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0033750,GO:0034399,GO:0034504,GO:0034613,GO:0034629,GO:0036094,GO:0042254,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044446,GO:0044464,GO:0044613,GO:0044614,GO:0045184,GO:0045934,GO:0046907,GO:0048519,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051029,GO:0051168,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051664,GO:0051668,GO:0060255,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0097064,GO:0097159,GO:0098772,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2001141 |
| EggNOG free text desc. | RNA transport |
| EggNOG OGs | KOG0845@1,KOG0845@2759,KOG3630@1,KOG3630@2759 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-09_002480.1 |
| Exons | 3 |
| Model size | 1517 |
| Cds size | 1515 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928296.2954285-CDS-Ecto-sp9_F_contig10766:1784..2656 | 1622928296.2954285-CDS-Ecto-sp9_F_contig10766:1784..2656 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 1785..2656 + |
| 1692277825.616565-CDS-Ecto-sp9_F_contig10766:1784..2656 | 1692277825.616565-CDS-Ecto-sp9_F_contig10766:1784..2656 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 1785..2656 + |
| 1622928296.3094556-CDS-Ecto-sp9_F_contig10766:3041..3292 | 1622928296.3094556-CDS-Ecto-sp9_F_contig10766:3041..3292 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 3042..3292 + |
| 1692277825.627119-CDS-Ecto-sp9_F_contig10766:3041..3292 | 1692277825.627119-CDS-Ecto-sp9_F_contig10766:3041..3292 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 3042..3292 + |
| 1622928296.322569-CDS-Ecto-sp9_F_contig10766:3880..4272 | 1622928296.322569-CDS-Ecto-sp9_F_contig10766:3880..4272 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 3881..4272 + |
| 1692277825.6359532-CDS-Ecto-sp9_F_contig10766:3880..4272 | 1692277825.6359532-CDS-Ecto-sp9_F_contig10766:3880..4272 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig10766 3881..4272 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10766.666.1 >prot_Ecto-sp9_F_contig10766.666.1 ID=prot_Ecto-sp9_F_contig10766.666.1|Name=mRNA_Ecto-sp9_F_contig10766.666.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=505bp
ATKGSSSSYPPMAATAPSVFGGAQKTPTPAGAPAAPATAPVSAAAAPAAA
AKPAKPAGGTSSFPPMASAAPSVFGSAKSSSAAAAAPAPGKTAASTTAAP
ATTALATAAAAAAAAPLPTPFGAGSGFGVAKPSPFGGAGKGAGIFGGGGS
LSAATSAATATAAAAPATSTATTATTAAAAAPAAGATTAGAAPATTGFAG
LSTLSSAAASTSGAAAAAAPAPAASSFGGAFGMGGFGAALGAAAATTTPA
PAAAAAAAAGPGDYRAQVLEIYNKYNPSKLGEVDTILKKYAGREATLIEK
LKKKYNVPAGATGAAGAASPFITPSKPAAAGASAAGNLFGSAAAAAATPS
PFGAGAGFGAAKPAAFGGGGFGQATAPSPFGQQTPGAAAPAPAAFGFGAT
ATQVSSTPSPFGAPAAAAAPTASPFGAAAPAPSPFGATPAAAPAASPFGA
PAAAAAAAPGASPFAAAPAGRGDPAVLRAWMQEVYTKFKPENVPKIDRLL
VKYT* back to topmRNA from alignment at Ecto-sp9_F_contig10766:1785..4272+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig10766.666.1 ID=mRNA_Ecto-sp9_F_contig10766.666.1|Name=mRNA_Ecto-sp9_F_contig10766.666.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2488bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10766:1785..4272+ (Ectocarpus species9 EcSCA_722f female)
GCCACGAAGGGCAGCAGCAGTAGCTATCCGCCGATGGCCGCGACGGCGCC
GAGCGTCTTCGGGGGCGCCCAGAAGACACCGACTCCTGCTGGTGCTCCTG
CGGCTCCCGCGACGGCCCCCGTCTCTGCCGCTGCTGCTCCTGCTGCTGCT
GCGAAGCCAGCCAAACCTGCGGGAGGAACCTCAAGCTTCCCCCCCATGGC
TAGCGCGGCACCGAGCGTTTTCGGCTCGGCAAAGTCCTCTTCTGCCGCAG
CAGCAGCGCCGGCGCCGGGCAAGACTGCAGCTTCTACCACCGCCGCTCCT
GCCACTACCGCCCTTGCTACAGCTGCTGCGGCAGCGGCAGCGGCGCCGCT
GCCGACTCCATTCGGTGCCGGAAGCGGGTTCGGCGTTGCCAAGCCTTCGC
CGTTCGGTGGGGCCGGCAAGGGCGCTGGCATATTTGGCGGGGGTGGGTCT
CTGTCCGCTGCAACCAGCGCTGCCACCGCCACCGCCGCCGCTGCTCCAGC
GACATCGACGGCCACGACCGCGACAACGGCGGCGGCGGCGGCTCCGGCTG
CTGGTGCTACGACTGCTGGTGCTGCTCCAGCGACAACAGGGTTTGCGGGA
CTGAGCACTCTGTCTTCCGCCGCGGCGTCAACCTCGGGTGCCGCCGCGGC
CGCTGCCCCCGCTCCCGCTGCGTCAAGCTTCGGGGGTGCGTTCGGCATGG
GCGGCTTCGGAGCGGCGCTCGGGGCAGCAGCAGCGACGACGACCCCGGCC
CCGGCGGCGGCGGCGGCGGCGGCGGCCGGGCCGGGAGACTACCGAGCGCA
GGTATTGGAGATCTACAACAAGTACAACCCGAGCAAGCTTGGCGAAGTGG
ACACCATCCTCAAGAAATATGCGTGAGTGTGTGCGCGTGTTCGTCCCATC
TATTCTGGCGCCGGTTTACAGCAGGCCTTTCGGCGGGTTGTCGGTGATGC
TTTTTGCGATACTCTTGGTGTTTGTTTTATCTTTTGGGTGCTGTTGTTGT
TTTGTTTTGCCAGCGCGCCCCTTTTCCTTTTGTCCGCACATACTCCATGA
TGAAAAACAGAAATATTTGAGCGAAACTTCCCATCGACCCCATTTCCTTT
CTCTCCCTTTCTCACCCTCCCTCTCGTCTTTGTGCTTCGGCACGACGACT
ACGGCCACACTCGCCCCCCCCCCCCCCCCCCCCCCGCACGCCTCTTCACG
GCTGTTGCCACCAAACTGCGGCCACCCACCGACACTATCACCACCGGTGG
CACGTAGTGGTCGAGAGGCGACCCTGATCGAGAAGCTCAAGAAGAAGTAC
AACGTACCGGCCGGTGCGACCGGCGCTGCCGGCGCCGCGTCGCCGTTCAT
CACCCCAAGCAAGCCCGCCGCTGCTGGTGCCTCTGCGGCCGGTAATTTGT
TCGGATCGGCGGCGGCGGCGGCGGCGACGCCGTCACCGTTCGGAGCCGGA
GCGGGATTCGGCGCCGCGAAGCCGGCGGCGTTTGGGGGGGGCGGGTTCGG
TCAGGCGAGTCTCACCAGCTATGCTTTCAGTAGACAACGGCGACATTATC
AGTAGGACAGCGGCCGGGATCCCTGTGTTGGTCACATATACAAGTTGTTC
TTCACCCTTTTTTCTAGACACAGATGGGATATTTCATGCTGGCTGGTACT
CTGAATAGAGCCGGGTGACCGGTATGATGCCGCCGGCCTAATCCCTTGGC
ACTATGCGTCTCTGCACGGGGACCGCTATTGCTGCTGTAGCCGTAGCGGC
AAGGTGTTCAAGCGTGGGTAGAGAACGGCAACACACACTTGTGAAAAGGG
TGGTGGTTGCTGTTCGTGCCGCCGCGGTTGGTGATTGGCCGGACGGGCCG
CGGATGGGTGTAATTTTCGCGTGTGAGGGGCGAACGGACACGTGTTGCGT
ATGCACGTGCACTCGTGTACCGTATGATGTTGATATTTAGAAGTAAGAGG
CTGCTTGTGCTTTGACGAGTGAAATGACCCTGTTCTTTCATTGGGGCTTC
GTTGTACCACGGCGTACATTTTCGATGAACTAAGGCACACAAACGAACCT
TCCGGAAACCCCGCCCCCCGTCCCCGCTCGATTTTCCAGTCCCCAGCTGC
CCCGTCACCCTTCGGACAGCAAACGCCTGGTGCCGCCGCTCCAGCACCAG
CCGCGTTCGGCTTCGGCGCTACCGCCACCCAGGTCTCTAGCACCCCCAGC
CCGTTCGGCGCCCCGGCTGCCGCCGCTGCTCCCACCGCGTCTCCGTTCGG
AGCTGCCGCCCCCGCCCCTTCCCCGTTCGGGGCTACCCCCGCCGCCGCAC
CGGCCGCTTCACCGTTCGGAGCTCCCGCCGCCGCCGCCGCCGCCGCTCCC
GGCGCTTCGCCGTTTGCTGCAGCGCCGGCCGGGCGGGGTGACCCCGCGGT
ACTTCGGGCGTGGATGCAGGAGGTGTACACCAAGTTTAAGCCGGAGAACG
TGCCGAAGATCGACCGGCTTCTGGTGAAGTACACGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig10766:1785..4272+ >mRNA_Ecto-sp9_F_contig10766.666.1 ID=mRNA_Ecto-sp9_F_contig10766.666.1|Name=mRNA_Ecto-sp9_F_contig10766.666.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3030bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10766:1785..4272+ (Ectocarpus species9 EcSCA_722f female)
GCCACGAAGGGCAGCAGCAGTAGCTATCCGCCGATGGCCGCGACGGCGCC
GAGCGTCTTCGGGGGCGCCCAGAAGACACCGACTCCTGCTGGTGCTCCTG
CGGCTCCCGCGACGGCCCCCGTCTCTGCCGCTGCTGCTCCTGCTGCTGCT
GCGAAGCCAGCCAAACCTGCGGGAGGAACCTCAAGCTTCCCCCCCATGGC
TAGCGCGGCACCGAGCGTTTTCGGCTCGGCAAAGTCCTCTTCTGCCGCAG
CAGCAGCGCCGGCGCCGGGCAAGACTGCAGCTTCTACCACCGCCGCTCCT
GCCACTACCGCCCTTGCTACAGCTGCTGCGGCAGCGGCAGCGGCGCCGCT
GCCGACTCCATTCGGTGCCGGAAGCGGGTTCGGCGTTGCCAAGCCTTCGC
CGTTCGGTGGGGCCGGCAAGGGCGCTGGCATATTTGGCGGGGGTGGGTCT
CTGTCCGCTGCAACCAGCGCTGCCACCGCCACCGCCGCCGCTGCTCCAGC
GACATCGACGGCCACGACCGCGACAACGGCGGCGGCGGCGGCTCCGGCTG
CTGGTGCTACGACTGCTGGTGCTGCTCCAGCGACAACAGGGTTTGCGGGA
CTGAGCACTCTGTCTTCCGCCGCGGCGTCAACCTCGGGTGCCGCCGCGGC
CGCTGCCCCCGCTCCCGCTGCGTCAAGCTTCGGGGGTGCGTTCGGCATGG
GCGGCTTCGGAGCGGCGCTCGGGGCAGCAGCAGCGACGACGACCCCGGCC
CCGGCGGCGGCGGCGGCGGCGGCGGCCGGGCCGGGAGACTACCGAGCGCA
GGTATTGGAGATCTACAACAAGTACAACCCGAGCAAGCTTGGCGAAGTGG
ACACCATCCTCAAGAAATATGCGCCACGAAGGGCAGCAGCAGTAGCTATC
CGCCGATGGCCGCGACGGCGCCGAGCGTCTTCGGGGGCGCCCAGAAGACA
CCGACTCCTGCTGGTGCTCCTGCGGCTCCCGCGACGGCCCCCGTCTCTGC
CGCTGCTGCTCCTGCTGCTGCTGCGAAGCCAGCCAAACCTGCGGGAGGAA
CCTCAAGCTTCCCCCCCATGGCTAGCGCGGCACCGAGCGTTTTCGGCTCG
GCAAAGTCCTCTTCTGCCGCAGCAGCAGCGCCGGCGCCGGGCAAGACTGC
AGCTTCTACCACCGCCGCTCCTGCCACTACCGCCCTTGCTACAGCTGCTG
CGGCAGCGGCAGCGGCGCCGCTGCCGACTCCATTCGGTGCCGGAAGCGGG
TTCGGCGTTGCCAAGCCTTCGCCGTTCGGTGGGGCCGGCAAGGGCGCTGG
CATATTTGGCGGGGGTGGGTCTCTGTCCGCTGCAACCAGCGCTGCCACCG
CCACCGCCGCCGCTGCTCCAGCGACATCGACGGCCACGACCGCGACAACG
GCGGCGGCGGCGGCTCCGGCTGCTGGTGCTACGACTGCTGGTGCTGCTCC
AGCGACAACAGGGTTTGCGGGACTGAGCACTCTGTCTTCCGCCGCGGCGT
CAACCTCGGGTGCCGCCGCGGCCGCTGCCCCCGCTCCCGCTGCGTCAAGC
TTCGGGGGTGCGTTCGGCATGGGCGGCTTCGGAGCGGCGCTCGGGGCAGC
AGCAGCGACGACGACCCCGGCCCCGGCGGCGGCGGCGGCGGCGGCGGCCG
GGCCGGGAGACTACCGAGCGCAGGTATTGGAGATCTACAACAAGTACAAC
CCGAGCAAGCTTGGCGAAGTGGACACCATCCTCAAGAAATATGCTGGTCG
AGAGGCGACCCTGATCGAGAAGCTCAAGAAGAAGTACAACGTACCGGCCG
GTGCGACCGGCGCTGCCGGCGCCGCGTCGCCGTTCATCACCCCAAGCAAG
CCCGCCGCTGCTGGTGCCTCTGCGGCCGGTAATTTGTTCGGATCGGCGGC
GGCGGCGGCGGCGACGCCGTCACCGTTCGGAGCCGGAGCGGGATTCGGCG
CCGCGAAGCCGGCGGCGTTTGGGGGGGGCGGGTTCGGTCAGGCGATGGTC
GAGAGGCGACCCTGATCGAGAAGCTCAAGAAGAAGTACAACGTACCGGCC
GGTGCGACCGGCGCTGCCGGCGCCGCGTCGCCGTTCATCACCCCAAGCAA
GCCCGCCGCTGCTGGTGCCTCTGCGGCCGGTAATTTGTTCGGATCGGCGG
CGGCGGCGGCGGCGACGCCGTCACCGTTCGGAGCCGGAGCGGGATTCGGC
GCCGCGAAGCCGGCGGCGTTTGGGGGGGGCGGGTTCGGTCAGGCGACTGC
CCCGTCACCCTTCGGACAGCAAACGCCTGGTGCCGCCGCTCCAGCACCAG
CCGCGTTCGGCTTCGGCGCTACCGCCACCCAGGTCTCTAGCACCCCCAGC
CCGTTCGGCGCCCCGGCTGCCGCCGCTGCTCCCACCGCGTCTCCGTTCGG
AGCTGCCGCCCCCGCCCCTTCCCCGTTCGGGGCTACCCCCGCCGCCGCAC
CGGCCGCTTCACCGTTCGGAGCTCCCGCCGCCGCCGCCGCCGCCGCTCCC
GGCGCTTCGCCGTTTGCTGCAGCGCCGGCCGGGCGGGGTGACCCCGCGGT
ACTTCGGGCGTGGATGCAGGAGGTGTACACCAAGTTTAAGCCGGAGAACG
TGCCGAAGATCGACCGGCTTCTGGTGAAGTACACGTGACTGCCCCGTCAC
CCTTCGGACAGCAAACGCCTGGTGCCGCCGCTCCAGCACCAGCCGCGTTC
GGCTTCGGCGCTACCGCCACCCAGGTCTCTAGCACCCCCAGCCCGTTCGG
CGCCCCGGCTGCCGCCGCTGCTCCCACCGCGTCTCCGTTCGGAGCTGCCG
CCCCCGCCCCTTCCCCGTTCGGGGCTACCCCCGCCGCCGCACCGGCCGCT
TCACCGTTCGGAGCTCCCGCCGCCGCCGCCGCCGCCGCTCCCGGCGCTTC
GCCGTTTGCTGCAGCGCCGGCCGGGCGGGGTGACCCCGCGGTACTTCGGG
CGTGGATGCAGGAGGTGTACACCAAGTTTAAGCCGGAGAACGTGCCGAAG
ATCGACCGGCTTCTGGTGAAGTACACGTGA back to top
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