prot_Ecto-sp9_F_contig10731.643.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10731.643.1
Unique Nameprot_Ecto-sp9_F_contig10731.643.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length234
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10731.643.1 vs.
Match: Glycosyl (transferase family 2 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV6_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.420e-145
Identity = 225/233 (96.57%), Postives = 226/233 (97.00%), Query Frame = 0 
Query:    1 IFNAVTGETTVPDDSPPKKIETLIKPGKAYPIKSQDWATRVYAAKSARSQASKGAGPDEIGRAALSKRLAARQQQGPREESGGTAAVFTLLVADAKKPQPFLSALGGRQSWDPEHRVTTAAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGEGEAWREALERGAVKLVPCSSGGADERRAGELSLACAAGDASVSEFVWVPGPAVAEALGMADAKRSTPSGRGAEVVTELSR 233
            +FNAVTGET VPDDSPPKKIETLIKPGKAYPIKSQDWATRVYAAKSARSQASKGAGPDEIGRAALSKRLAARQ QGPREESGGTAAV TLLVADAKKPQPFLSALGGRQSWDPEHR T AAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGEGEAWREALERGAVKLVPCSSGGADERRAGELSLACAAGDASVSEFVWVPGPAVAEALGMADAKRSTPSGRGAEVV  LSR
Sbjct:  105 VFNAVTGETKVPDDSPPKKIETLIKPGKAYPIKSQDWATRVYAAKSARSQASKGAGPDEIGRAALSKRLAARQLQGPREESGGTAAVLTLLVADAKKPQPFLSALGGRQSWDPEHRATAAAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGEGEAWREALERGAVKLVPCSSGGADERRAGELSLACAAGDASVSEFVWVPGPAVAEALGMADAKRSTPSGRGAEVVARLSR 337
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BLAST of mRNA_Ecto-sp9_F_contig10731.643.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY98_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 2.990e-123
Identity = 198/233 (84.98%), Postives = 206/233 (88.41%), Query Frame = 0 
Query:    1 IFNAVTGETTVPDDSPPKKIETLIKPGKAYPIKSQDWATRVYAAKSARSQASKGAGPDEIGRAALSKRLAARQQQGPREESGGTAAVFTLLVADAKKPQPFLSALGGRQSWDPEHRVTTAAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGEGEAWREALERGAVKLVPCSSGGADERRAGELSLACAAGDASVSEFVWVPGPAVAEALGMADAKRSTPSGRGAEVVTELSR 233
            +FNAVTGET VPDDSPPKKIE LIKPGK YPI+S+DWA+RVYAAKSARSQASKGAGPDE                GPREESGGTAAV TLLVAD K+PQPFLSALGGRQ+WDPEHR TTAAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGE EAWREALERGAVKLVPCS GGADERRAGELSLACAAGDASVSEFVW+PGP VAEALG ADAKRSTPSGRGAEVV+EL R
Sbjct:  100 VFNAVTGETKVPDDSPPKKIEKLIKPGKTYPIQSRDWASRVYAAKSARSQASKGAGPDE----------------GPREESGGTAAVLTLLVADTKQPQPFLSALGGRQNWDPEHRTTTAAAGAGEAEWAWEEVFVCEEDEGALDGILGSRGEREAWREALERGAVKLVPCSFGGADERRAGELSLACAAGDASVSEFVWLPGPRVAEALGRADAKRSTPSGRGAEVVSELYR 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10731.643.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Glycosyl1.420e-14596.57transferase family 2 protein n=1 Tax=Ectocarpus si... [more]
Uncharacterized2.990e-12384.98protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10731contigEcto-sp9_F_contig10731:334..3276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10731.643.1mRNA_Ecto-sp9_F_contig10731.643.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10731 334..3276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10731.643.1 ID=prot_Ecto-sp9_F_contig10731.643.1|Name=mRNA_Ecto-sp9_F_contig10731.643.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=234bp
IFNAVTGETTVPDDSPPKKIETLIKPGKAYPIKSQDWATRVYAAKSARSQ
ASKGAGPDEIGRAALSKRLAARQQQGPREESGGTAAVFTLLVADAKKPQP
FLSALGGRQSWDPEHRVTTAAAGAGEAEWAWEEVFVCEEDEGALDGILGS
RGEGEAWREALERGAVKLVPCSSGGADERRAGELSLACAAGDASVSEFVW
VPGPAVAEALGMADAKRSTPSGRGAEVVTELSR*
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