prot_Ecto-sp9_F_contig10723.642.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10723.642.1
Unique Nameprot_Ecto-sp9_F_contig10723.642.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10723.642.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.610e-8
Identity = 58/104 (55.77%), Postives = 60/104 (57.69%), Query Frame = 0 
Query:    1 HGRRPAHGDRRRSSSPTHGPARGPFEEYGGLHLHHGPGRHNXXXXXXXXXXXXXXXEEMAMMHVGPRGPPHGMHPPRHLRGQPKGGPRRHGMPMHDRQMHPFHG 104
            HG+R AHGD   SS P H P  GPF E G     HGPG    XXXXXXXXXX    EEMAM H  PRGPPHGM P              HGMPMHDR+MH  HG
Sbjct:  241 HGKRRAHGDHLHSSGPVHEPPPGPFHESG--RPLHGPGH---XXXXXXXXXXDVEQEEMAM-HTRPRGPPHGM-PXXXXXXXXXXXXXXHGMPMHDREMHLHHG 337
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10723.642.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized2.610e-855.77protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10723contigEcto-sp9_F_contig10723:3..773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10723.642.1mRNA_Ecto-sp9_F_contig10723.642.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10723 3..773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10723.642.1 ID=prot_Ecto-sp9_F_contig10723.642.1|Name=mRNA_Ecto-sp9_F_contig10723.642.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=257bp
HGRRPAHGDRRRSSSPTHGPARGPFEEYGGLHLHHGPGRHNHHHHHHHGG
GESEGEEEMAMMHVGPRGPPHGMHPPRHLRGQPKGGPRRHGMPMHDRQMH
PFHGGRRFHGEGVHSSGGEGERGPGMHMGPGHRAHPRRHPEHHGIHHLDN
DGDTAGMDMDHGPLLHRAGRHHHRSPVGLHHRPHGPPPGPPPGPPGMRGG
MRCEDFGDDFHPRQHQRHEQHQQHQQQHGRMAAVRARVHPCHKRRAPLQM
MPMQAY*
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