prot_Ecto-sp9_F_contig1071.633.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1071.633.1
Unique Name	prot_Ecto-sp9_F_contig1071.633.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	322

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig1071.633.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX8_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.220e-63
Identity = 273/322 (84.78%), Postives = 275/322 (85.40%), Query Frame = 0

Query:    1 RNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIXXXXXXXXXXXXXXXXPRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEWAVLLPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQAADGGWPPAGLKSVVVGSKFSGDATESAXXXXXXXXXXXXXXXXXFSITRRLSPRRARRRGSKINT 322
            RNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIXXXXXXXXXXXXXXXXPRPAAA                         XXXXXXXXX   AAEWAV LPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQAADGGWPPAGLKSVVVGSKFSGDA ES+                 FSITRRLSPRRARRRGSKI+T
Sbjct:  842 RNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIXXXXXXXXXXXXXXXXPRPAAAAIAAAGRPSSPRPSSGGDKAAMVVPXXXXXXXXXGAGAAEWAVFLPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQAADGGWPPAGLKSVVVGSKFSGDAAESSSAAATSEGTGDEGGGEGFSITRRLSPRRARRRGSKIDT 1163

[Close]

BLAST of mRNA_Ecto-sp9_F_contig1071.633.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M3_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.810e-48
Identity = 261/288 (90.62%), Postives = 262/288 (90.97%), Query Frame = 0

Query:    1 RNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIXXXXXXXXXXXXXXXXPRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AAEWAVLLPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQAADGGWPPAGLKSVVVGSKFSGDATESA 284
            RNDEDLGDDFA DLPLDLETLTFAFAFNRLPADGVEI                PRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A  WAVLLPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQ+ADGGWPPAGL SVVVGSKFSGDA E A
Sbjct: 1095 RNDEDLGDDFARDLPLDLETLTFAFAFNRLPADGVEIDWPPDLKAVHFGMAFNPRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAVGWAVLLPPSLEEVVFGGHFNQPVEGVAWXXXXXXXXXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPWPTPSLTHLTFGKGFDQPLPQSADGGWPPAGLTSVVVGSKFSGDAAEPA 1382

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1071.633.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1071.633.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	1.220e-63	84.78	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.810e-48	90.63	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 117..159 e-value: 1.9E-5 score: 24.8
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 15..259

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1071	contig	Ecto-sp9_F_contig1071:23485..26414 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1071.633.1	mRNA_Ecto-sp9_F_contig1071.633.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1071 23483..26414 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1071.633.1 ID=prot_Ecto-sp9_F_contig1071.633.1|Name=mRNA_Ecto-sp9_F_contig1071.633.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=322bp
RNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIDWPPDLKAVHFGM
AFNPRPAAAAAAAAGRPSSPRPSSGGDKAAMVVPAKGSGPPPPGAGAAEW
AVLLPPSLEEVVFGGHFNQPVEGVAWPPGLRRLVFGANFKQKVEEADWPD
SLEEMTFGSYFNNPIERVKWPKSLRKLVFGTGFNQPVENCSFSGSLEDIV
FGTHFNQPVAGLRWPSSLQRATFGDRFNKPVVSSPWPTPSLTHLTFGKGF
DQPLPQAADGGWPPAGLKSVVVGSKFSGDATESAAAAAAAEGTGEEGGGG
GFSITRRLSPRRARRRGSKINT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP