prot_Ecto-sp9_F_contig107.619.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig107.619.1
Unique Nameprot_Ecto-sp9_F_contig107.619.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length259
Homology
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX61_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 1.290e-173
Identity = 249/258 (96.51%), Postives = 254/258 (98.45%), Query Frame = 0
Query:    1 MDDSIIGPNRWIDRSERSGLGLLGVEAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 258
            MD+S  GPNRW+DRSERSGLGLLG EAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDK+DLQYTYKEGDMYYFMDSATYEE+SIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGA+INVPLFITTGEKIRVD DSKKYMERAKE
Sbjct:    1 MDEST-GPNRWMDRSERSGLGLLGAEAFVLPSATLRQGSFAQQQQQQRGVTRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKVDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAIINVPLFITTGEKIRVDIDSKKYMERAKE 257          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN57_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 1.270e-127
Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
Query:   72 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 258
            MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEE+SIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVA+GAMINVPLFITTGEKIRVDTDSKKYMERAKE
Sbjct:    1 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEVSIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVASGAMINVPLFITTGEKIRVDTDSKKYMERAKE 187          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P (EF-P) KOW-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK22_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.870e-75
Identity = 107/187 (57.22%), Postives = 151/187 (80.75%), Query Frame = 0
Query:   72 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 258
            M ST+DFK G+TI++DG P ++ EFLHVKPGKG+AFVR+K+KNLITGN++EKTFRAGEP+  AQV++L LQ+TY +G  + FMD+ ++EE+ +A+ ++GDKA +  EGM+L A  +  ++I+V++P+ M+L V +TDPG KGNTAQG +KPA +  G ++ VPLFI  GEKI+VDT+ +KYMER+KE
Sbjct:    1 MASTSDFKTGLTIEVDGAPVRVQEFLHVKPGKGAAFVRSKLKNLITGNTVEKTFRAGEPITLAQVERLTLQFTYDDGTNFCFMDTTSFEEVQMAKSILGDKADWLQEGMQLEALQWTDRIIDVSIPRTMVLTVTQTDPGVKGNTAQGGSKPATLETGVVLQVPLFINEGEKIKVDTEERKYMERSKE 187          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9YEZ9_HALP7)

HSP 1 Score: 219 bits (559), Expect = 5.990e-69
Identity = 102/184 (55.43%), Postives = 144/184 (78.26%), Query Frame = 0
Query:   72 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 255
            M S+ DF+ GMTI+++GN  +++EFLHVKPGKGSAFVRTK+KN+ +GN +E+TFRAGE V QA ++K ++Q+TYKEGD Y FMD  ++EE+ I  + +GD+A +  EGME+SA Y++G ++EV +P  ++LEVVETDPG KG+TA G +KPA V  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGMTIELEGNVWRVVEFLHVKPGKGSAFVRTKLKNVQSGNVVERTFRAGETVPQATLEKREMQHTYKEGDEYVFMDMESFEEVRIPPETIGDRAKYINEGMEISAVYWEGNILEVEVPNSVVLEVVETDPGVKGDTATGGSKPATVETGAQVMVPLFISVGERIKIDTRNDTYVGR 184          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCL6_9STRA)

HSP 1 Score: 218 bits (556), Expect = 6.460e-68
Identity = 106/190 (55.79%), Postives = 143/190 (75.26%), Query Frame = 0
Query:   71 SMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKE--GDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERAKE 258
            SM ST+DFKNG+T+++DG P KI+EF+HVKPGKG+AFVR+K+KNL+ G+ +EKT+RAGE VE AQV+K D+Q+TY +     Y FMD A++EE++    V+G KA F  +GME++   +  K+I+V LP+ M+ EVVETDPG KGNT QG TKPA +  GA++ VPLF+  GE I+VDT   KY+ RA E
Sbjct:   38 SMASTSDFKNGLTLEVDGTPVKIVEFMHVKPGKGAAFVRSKLKNLMNGSVVEKTWRAGEKVELAQVEKFDMQFTYFDDSSSSYMFMDVASFEEVACDADVLGSKASFLKDGMEVAGIKWNEKIIDVELPQTMVYEVVETDPGVKGNTVQGGTKPATLDGGAVVAVPLFVEQGEMIKVDTKEGKYLSRAAE 227          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Hypothetical (protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPI6_DIALT)

HSP 1 Score: 214 bits (546), Expect = 8.260e-67
Identity = 109/188 (57.98%), Postives = 138/188 (73.40%), Query Frame = 0
Query:   69 ALSMGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMERA 256
            A+SM ++ DFK GMTI+ D  P K++EFLHVKPGKGSAFVR+K+KNLITGN++EKT+RAGE V  A+V+K D+QYTYKEGD Y FMD A++EE+ I  K + D+  F  E        + G++I V LP QM L+V+ET PG KGNT QG  KPA +  GA+I VPLFI  GE++RVDT  KKY+ RA
Sbjct:    9 AVSMLTSNDFKVGMTIESDAVPYKVIEFLHVKPGKGSAFVRSKLKNLITGNTMEKTWRAGESVGAAEVEKFDVQYTYKEGDQYVFMDMASFEEMRIDAKAI-DQIDFLKESGSAQVAKWNGQIISVELPNQMNLKVIETMPGVKGNTVQGGQKPATLETGAVIQVPLFIEEGEEVRVDTIEKKYLSRA 195          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJD2_9RHOD)

HSP 1 Score: 216 bits (550), Expect = 1.520e-66
Identity = 104/182 (57.14%), Postives = 137/182 (75.27%), Query Frame = 0
Query:   74 STADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 255
            S+ DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGNS+E+TFRAGE V +AQV+K+++QYTY E   Y FM+  T+EE  I    VGD A +   G ++S T + GK IEV +P  M LEVVETDPG +GNTAQG +KPAK+  G +I VPLFI  GEK++VDT +  Y+ R
Sbjct:   79 SSNDFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNSMERTFRAGESVPEAQVEKVEMQYTYAEESDYVFMNMTTFEEERIPASTVGDTAKYLRTGQDVSVTKWNGKPIEVEVPTTMTLEVVETDPGVRGNTAQGGSKPAKLETGVVIQVPLFINVGEKVKVDTRTGTYLSR 260          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=EFP_SYNE7)

HSP 1 Score: 213 bits (543), Expect = 1.540e-66
Identity = 105/184 (57.07%), Postives = 135/184 (73.37%), Query Frame = 0
Query:   72 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 255
            M S+ DF+ G TI+IDG   +++EFLHVKPGKGSAFVRTK+KN  TGN +EKTFRAGE V QA ++K  LQYTYK+GD + FMD  TYEE  +    +GD+  +  EGME +   + G+VIEV LP  ++LEV+ETDPG KG+TA G TKPAKV  GA + VPLFI+ GE+I++DT +  Y+ R
Sbjct:    1 MISSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQAVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVIEVELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSYLGR 184          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: Elongation (factor P n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I583_9BACT)

HSP 1 Score: 213 bits (541), Expect = 3.200e-66
Identity = 101/179 (56.42%), Postives = 136/179 (75.98%), Query Frame = 0
Query:   77 DFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 255
            DF+ G+TI++DG+P K++E LHVKPGKG+AFVRTK+KNL+TGN++E+TFRAGE V +AQV+K + QYTY   + Y FM+ AT+EE  +  +VVGD A +   G ++S T + GK IEV +P  + LEVVETDPG +GNTAQG +KPAK+  G ++ VPLFI  GEKI+VDT +  Y+ R
Sbjct:    7 DFRVGLTIEVDGSPFKVIEHLHVKPGKGAAFVRTKLKNLLTGNTMERTFRAGETVPEAQVEKFEAQYTYPAENEYVFMNMATFEEEHVPNEVVGDTAKYLRVGQDVSVTKWNGKPIEVEVPATLTLEVVETDPGVRGNTAQGGSKPAKLETGVVVQVPLFIEVGEKIKVDTRTGSYLSR 185          
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Match: elongation (factor P n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055CAF5D)

HSP 1 Score: 213 bits (541), Expect = 3.200e-66
Identity = 102/184 (55.43%), Postives = 141/184 (76.63%), Query Frame = 0
Query:   72 MGSTADFKNGMTIDIDGNPCKILEFLHVKPGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDMYYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQMILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSKKYMER 255
            M S+ DF+ G+TI++DG+  +++EFLHVKPGKGSAFVRTK+KN+ TGNS+E+TFRAGE V QA ++K  +Q+TYKEGD Y FMD  TYEE  ++E+ +GD+  +  E ME++  +++ +V+EV LP  +ILE+ +TDPG KG+TA G TKPA V +GA + VPLFI+ GEKI+VDT    Y+ R
Sbjct:    1 MISSNDFRTGVTIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNSVERTFRAGETVPQANLEKRTMQHTYKEGDQYVFMDMETYEETRMSEEQMGDRVQYLKEEMEVNVIFWEDQVLEVELPTSVILEITDTDPGVKGDTATGGTKPAIVESGAQVMVPLFISIGEKIKVDTRDGSYLGR 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig107.619.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Elongation1.290e-17396.51factor P n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Uncharacterized1.270e-12798.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Elongation1.870e-7557.22factor P (EF-P) KOW-like domain-containing protein... [more]
Elongation5.990e-6955.43factor P n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9... [more]
Hypothetical6.460e-6855.79protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical8.260e-6757.98protein n=3 Tax=Diacronema lutheri TaxID=2081491 R... [more]
Uncharacterized1.520e-6657.14protein n=1 Tax=Cyanidiococcus yangmingshanensis T... [more]
Elongation1.540e-6657.07factor P n=4 Tax=Synechococcus elongatus TaxID=320... [more]
Elongation3.200e-6656.42factor P n=1 Tax=bacterium TaxID=1869227 RepID=A0A... [more]
elongation3.200e-6655.43factor P n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015365Elongation factor P, C-terminalSMARTSM00841Elong_fact_P_C_2coord: 200..255
e-value: 3.0E-26
score: 103.2
IPR015365Elongation factor P, C-terminalPFAMPF09285Elong-fact-P_Ccoord: 202..255
e-value: 9.6E-23
score: 79.7
IPR001059Translation elongation factor P/YeiP, centralSMARTSM01185EFP_2coord: 138..192
e-value: 2.3E-20
score: 83.7
IPR001059Translation elongation factor P/YeiP, centralPFAMPF01132EFPcoord: 140..192
e-value: 1.2E-18
score: 66.9
NoneNo IPR availableGENE3D2.40.50.140coord: 200..256
e-value: 2.4E-23
score: 83.3
NoneNo IPR availableGENE3D2.40.50.140coord: 135..198
e-value: 1.7E-20
score: 74.6
NoneNo IPR availablePANTHERPTHR30053:SF12ELONGATION FACTOR P-LIKE PROTEINcoord: 61..256
IPR013185Translation elongation factor, KOW-likePFAMPF08207EFP_Ncoord: 74..130
e-value: 3.1E-26
score: 91.2
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 72..133
e-value: 1.0E-27
score: 97.6
IPR011768Translation elongation factor PTIGRFAMTIGR00038TIGR00038coord: 74..256
e-value: 6.0E-72
score: 239.1
IPR011768Translation elongation factor PHAMAPMF_00141EF_Pcoord: 72..256
score: 45.465
IPR020599Translation elongation factor P/YeiPPANTHERPTHR30053ELONGATION FACTOR Pcoord: 61..256
IPR013852Translation elongation factor P/YeiP, conserved sitePROSITEPS01275EFPcoord: 221..240
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 72..132
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 136..197
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 200..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig107contigEcto-sp9_F_contig107:16854..21478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig107.619.1mRNA_Ecto-sp9_F_contig107.619.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig107 16854..22318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig107.619.1 ID=prot_Ecto-sp9_F_contig107.619.1|Name=mRNA_Ecto-sp9_F_contig107.619.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=259bp
MDDSIIGPNRWIDRSERSGLGLLGVEAFVLPSATLRQGSFAQQQQQQRGV
TRWTAAAGPRTARGGGVGALSMGSTADFKNGMTIDIDGNPCKILEFLHVK
PGKGSAFVRTKVKNLITGNSLEKTFRAGEPVEQAQVDKLDLQYTYKEGDM
YYFMDSATYEEISIAEKVVGDKAGFFLEGMELSATYFKGKVIEVTLPKQM
ILEVVETDPGEKGNTAQGATKPAKVAAGAMINVPLFITTGEKIRVDTDSK
KYMERAKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015365Elong-fact-P_C
IPR001059Transl_elong_P/YeiP_cen
IPR013185Transl_elong_KOW-like
IPR014722Rib_L2_dom2
IPR011768Transl_elongation_fac_P
IPR020599Transl_elong_fac_P/YeiP
IPR013852Transl_elong_P/YeiP_CS
IPR008991Translation_prot_SH3-like_sf
IPR012340NA-bd_OB-fold