prot_Ecto-sp9_F_contig10656.590.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10656.590.1
Unique Nameprot_Ecto-sp9_F_contig10656.590.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length215
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10656.590.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN12_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.150e-21
Identity = 63/106 (59.43%), Postives = 65/106 (61.32%), Query Frame = 0 
Query:  102 SYARDWVCLMAAAGEDKEEEKMELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTRPASQQESAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTVTAEGRQ 207
            S+ RD VCLMA         KMELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTR ASQQE AG                            PPT+TAEGRQ
Sbjct:   47 SHNRDRVCLMAXXXXXXXXXKMELAAEVVGAVTKATVGFAVDRAAATVSEEQGLPPRTRAASQQEWAGAKRKALVGLLGNFVAFLKTDDDASPPGNPPTLTAEGRQ 152
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BLAST of mRNA_Ecto-sp9_F_contig10656.590.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I8_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 3.150e-7
Identity = 38/77 (49.35%), Postives = 39/77 (50.65%), Query Frame = 0 
Query:   54 MLFSTLLXXXXXXXXXXXXXXXXXXCRLRXXXXXXXXXXXXXXXXXGISYARDWVCLMAAAGEDKEEE-KMELAAEV 129
            ML STLL                  CRLR                 GISYAR+ VCLMAAAGEDKEEE KMELAAEV
Sbjct:    1 MLLSTLLLLVRGETAAAPPAAFVGDCRLRLAASESGGRTALSAGGGGISYARNRVCLMAAAGEDKEEEEKMELAAEV 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10656.590.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.150e-2159.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.150e-749.35protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10656contigEcto-sp9_F_contig10656:2978..4391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10656.590.1mRNA_Ecto-sp9_F_contig10656.590.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10656 2977..4391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10656.590.1 ID=prot_Ecto-sp9_F_contig10656.590.1|Name=mRNA_Ecto-sp9_F_contig10656.590.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=215bp
MTMMSGGRLPWRPWCRHSCASSASTKPAPRCVWRTYQCCCCHHVRHRQLV
PLGMLFSTLLLLVRGETAAAPPAAFVGGCRLRLAASESGGRTVLSGGGGG
ISYARDWVCLMAAAGEDKEEEKMELAAEVVGAVTKATVGFAVDRAAATVS
EEQGLPPRTRPASQQESAGAKRKALVGLLGNFVAFLKADDDASPPRNPPT
VTAEGRQVCRGGGGV
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