prot_Ecto-sp9_F_contig10619.565.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10619.565.1
Unique Nameprot_Ecto-sp9_F_contig10619.565.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length321
Homology
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: DEAD/DEAH (box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 5.590e-105
Identity = 258/321 (80.37%), Postives = 263/321 (81.93%), Query Frame = 0
Query:    1 QRGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEGAKKAAVSAGGAXXXXRGREVGPGXXXXXXXXXXXXXQAVSDAASRSRGGEGGDGSVSGVPAKEGGVEDTGDEESNGXXXXXXXXXXXXXXXXXXXXXXXXXKGRTRGSKKRGRGEQRSGAGGEASPESAALLEAGIVGDMAAVASSVGDPSSGGSGGDAGTPGSRRRTPGSGAAGGEXXXXXXXXXXXXXGDEWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            +RGAVV+EANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEGAKKAA      XXXX        XXXXXXX      QAVSDA                VPAKEGGVEDTGD     XXXXXXXXXXXXXXXXXXXXXXXXXKGRTRGSKKRGR           SPESAALLEAGIVGDMAAVAS++GDPSSGGSGGDAGTPGSR RTPGSGAAG  XXXXXXXXXXXXX  EWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDL KTAPQMVPLVQGYRGGYTKDERRKIEGSLFANK+
Sbjct:  245 ERGAVVEEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEGAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXRQGEGEQAVSDAXXXXXXXX--XXXXXXVPAKEGGVEDTGDXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXKGRTRGSKKRGRXXXXXXXXXXXSPESAALLEAGIVGDMAAVASAIGDPSSGGSGGDAGTPGSRTRTPGSGAAGXXXXXXXXXXXXXXXXXEWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLGKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKL 562          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.730e-76
Identity = 255/519 (49.13%), Postives = 266/519 (51.25%), Query Frame = 0
Query:    1 QRGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDE-------------------------------------------------------------------------------------------------GAKK---AAVSAGGAXXXX--------------------------------------------------------------------RGRE---VGPGXXXXXXXXXXXXXQAV-----------------SDAASRSRGGEGGDGSVSGVPAKEGGVEDTGDEESNGXXXXXXXXXXXXXXXXXXXXXXXXXKGRTR-----GSKKRGRGEQRSGAGGEASPESAALLEAGIVGDMAAVASSVGDPSSGGSGGDAGTPGSRRRTPGSGAAGGEXXXXXXXXXXXXXGDE-----WEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            +RGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDE                                                                                                 GAKK   +AVSAGGA   X                                                                    RG E    GP               A+                 S    R  G      SVSG+PAKEGGVE TGDE S+G   XXXXXXXXXXXXXXXXXXXXXX          GSKKRGR EQR+GA GEASPE+AALLEAG+V DMAAVAS+VGDPSSGGSGGDAGTPGSR RTPGS      XXXXXXXXXXXXX        WEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQ+VPLVQGYRGGYTKDERRKIEGSLFANK+
Sbjct:  429 ERGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEAHVYRGAFGAHVSMVLRRLLRLWSVNALPGPPPQFICCSATMSSAPSHFASLLPLEECLGGRRNLYLGSVDTAPSSRKTFVLWRPPIVAEWFTSPSEGAKKEAVSAVSAGGAGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLRGLEGWRKGPSDNFYNKEYLKLMGAALPRPSPLPXXXXXXXXXXSPPFVRGTGA-----SVSGIPAKEGGVEATGDEVSSGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKKRGRREQRAGAAGEASPEAAALLEAGMVVDMAAVASAVGDPSSGGSGGDAGTPGSRTRTPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXWEDGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQLVPLVQGYRGGYTKDERRKIEGSLFANKL 942          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKV5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.610e-26
Identity = 53/79 (67.09%), Postives = 66/79 (83.54%), Query Frame = 0
Query:  243 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            RRRS I ETA++L+ALVKQ V+TLAFCRTRKLTEL L+Y  +DLE +AP +V  V+GYRGGYTK +RR+IEG LF+ K+
Sbjct:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKL 79          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.540e-19
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 0
Query:  245 RSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            RS I ETA +  AL+KQRV+TLAFCR RKL EL LRY  QDL  TAP++   V+GYRGGY+K ERR+IE  LF  K+
Sbjct:  165 RSAIVETAMVFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLARRVRGYRGGYSKAERREIEAQLFGGKL 241          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.540e-18
Identity = 47/75 (62.67%), Postives = 56/75 (74.67%), Query Frame = 0
Query:  243 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLF 317
            R RS I ETA +  AL+KQRV+TLAFCR RKL EL LRY  QDL  TAP++   V+GYRGGY+K +RR+IE  LF
Sbjct:  160 RPRSAIVETAMLFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLAQRVRGYRGGYSKKDRREIERRLF 234          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Uncharacterized (protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 90.9 bits (224), Expect = 1.900e-16
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 0
Query:  246 SPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            S I + A IL+ALVKQ V+TLAF + RK+TEL L+Y   DL+ TAPQ+V  V+ YR GYTK+ERR IE +LFA K+
Sbjct:  694 SAILQAALILSALVKQHVRTLAFAKVRKVTELVLKYTRHDLKHTAPQLVARVKSYRAGYTKEERRAIERALFAGKI 769          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RH75_VANPL)

HSP 1 Score: 85.5 bits (210), Expect = 1.210e-14
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0
Query:  239 WE-DGRRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            WE   RR SPI ET+ + A +++  ++ +AFC+TRKL+EL L Y  + L+KTA  +V ++  YRGGYT  ERR+IE  LF NK+
Sbjct:  685 WEISTRRTSPILETSHLFAEMIQHGLRCIAFCKTRKLSELVLCYTREILQKTASDLVDVISVYRGGYTPKERRRIEADLFENKL 768          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHE3_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.170e-14
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:  259 VKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            VK+RV+T+AF RTRKLTEL LRY  QDL  TAP +V  V+ YRGGYTK++RR IE  LF  ++
Sbjct:    1 VKRRVRTIAFSRTRKLTELVLRYTLQDLTATAPGLVKFVKSYRGGYTKEDRRAIEAQLFQGQL 63          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: uncharacterized (protein LOC104818356 isoform X4 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C8882)

HSP 1 Score: 81.3 bits (199), Expect = 2.950e-13
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0
Query:  243 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            R  SPI E A + A +V+  ++ +AFCR+RKL EL L    + L KTAP +V  +  YRGGYT ++RRKIEG LF  K+
Sbjct:  459 RTSSPISEVALLFAEMVRHGLRCIAFCRSRKLCELVLCLTREILAKTAPHLVEAISSYRGGYTAEDRRKIEGGLFGGKL 537          
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Match: uncharacterized (protein LOC104818356 isoform X1 n=3 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4BCA)

HSP 1 Score: 81.3 bits (199), Expect = 3.130e-13
Identity = 39/79 (49.37%), Postives = 52/79 (65.82%), Query Frame = 0
Query:  243 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKV 321
            R  SPI E A + A +V+  ++ +AFCR+RKL EL L    + L KTAP +V  +  YRGGYT ++RRKIEG LF  K+
Sbjct:  704 RTSSPISEVALLFAEMVRHGLRCIAFCRSRKLCELVLCLTREILAKTAPHLVEAISSYRGGYTAEDRRKIEGGLFGGKL 782          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10619.565.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DEAD/DEAH5.590e-10580.37box helicase domain-containing protein n=1 Tax=Ect... [more]
Uncharacterized2.730e-7649.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
P-loop8.610e-2667.09containing nucleoside triphosphate hydrolase prote... [more]
Hypothetical1.540e-1962.34protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
Hypothetical4.540e-1862.67protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized1.900e-1659.21protein n=1 Tax=Salpingoeca rosetta (strain ATCC 5... [more]
Uncharacterized1.210e-1448.81protein n=2 Tax=Vanilla planifolia TaxID=51239 Rep... [more]
Hypothetical5.170e-1461.90protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
uncharacterized2.950e-1349.37protein LOC104818356 isoform X4 n=1 Tax=Tarenaya h... [more]
uncharacterized3.130e-1349.37protein LOC104818356 isoform X1 n=3 Tax=Tarenaya h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 245..319
coord: 2..45
NoneNo IPR availablePANTHERPTHR24031:SF668UBQ, HELICASE-C AND DEAD-LIKE HELICASE DOMAIN-CONTAINING PROTEINcoord: 245..319
coord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10619contigEcto-sp9_F_contig10619:508..3979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10619.565.1mRNA_Ecto-sp9_F_contig10619.565.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10619 508..3979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10619.565.1 ID=prot_Ecto-sp9_F_contig10619.565.1|Name=mRNA_Ecto-sp9_F_contig10619.565.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=321bp
QRGAVVDEANIILTNPDMLHASVLPGHKKFRRILGNLSHVVIDEGAKKAA
VSAGGAGGGGRGREVGPGAAAAGGGREGEGEQAVSDAASRSRGGEGGDGS
VSGVPAKEGGVEDTGDEESNGGGGGGGSGAATGKAAGAPAAAAAAAKGRT
RGSKKRGRGEQRSGAGGEASPESAALLEAGIVGDMAAVASSVGDPSSGGS
GGDAGTPGSRRRTPGSGAAGGEGEGEGEGGGEGGGGDEWEDGRRRSPICE
TAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQMVPLVQGY
RGGYTKDERRKIEGSLFANKV
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