prot_Ecto-sp9_F_contig10574.523.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10574.523.1
Unique Nameprot_Ecto-sp9_F_contig10574.523.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Similar (to ATP binding / alanine-tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB2_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.360e-66
Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0
Query:    1 MANMETVVKMADQEHGDEAPSSSSSSAQEGPARGAAGRGREEVAVVAERGGRGGRGKVPASSTAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAPSSSPS 125
            MANMET+VKMADQEHGDEAPSSSSSSAQEGP+RGAAGRGREEV VVAERGGRGGRGKVPASSTAAAATKYGAATR VTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAPSSS S
Sbjct:  165 MANMETMVKMADQEHGDEAPSSSSSSAQEGPSRGAAGRGREEVTVVAERGGRGGRGKVPASSTAAAATKYGAATRTVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAPSSSSS 289          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: tRNA_SAD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV6_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.950e-53
Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0
Query:   13 QEHGDEAPSSSSSSAQEGPARGAAGRGREEVAVVAERGGRGGRGKVPASSTAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAPSS 122
            +EHGDEAPSSS+SSAQEGPARGAAG GREEVAVVAE  GR G+G VPAS TAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGVRITK KAKKGT+RVSYTLAPSS
Sbjct:   21 EEHGDEAPSSSASSAQEGPARGAAGTGREEVAVVAEPEGRRGKGNVPASLTAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGVRITKAKAKKGTIRVSYTLAPSS 130          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Alanyl-tRNA (editing protein AlaX-M-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.240e-12
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0
Query:   75 RIVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLA 119
            R+V+V G +CPCGGTHVRST E+ G+R+TK KAK G LRVSYT+A
Sbjct:  179 RVVSVGGCACPCGGTHVRSTAELRGLRVTKAKAKSGRLRVSYTIA 223          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Hypothetical (protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVS7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.080e-10
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   75 RIVTVAGL-SCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLAP 120
            R+VTVAG  +CPCGGTHVRST E+ GV +TKVK+KKG ++VSY++ P
Sbjct:  236 RVVTVAGGGTCPCGGTHVRSTAELGGVTVTKVKSKKGRIKVSYSVTP 282          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSC3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.730e-8
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   71 GAATRIVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSY 116
            GA  R+V V G  CPCGGTHV +  E+E V +T++KAKKGT++VSY
Sbjct:  245 GAMIRVVNVGGCWCPCGGTHVGNASELERVTVTRIKAKKGTVKVSY 290          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: AA_TRNA_LIGASE_II_ALA (domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZR6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.860e-7
Identity = 24/45 (53.33%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   75 RIVTVAGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTLA 119
            R+V+V G  CPCGGTHV+ST+E+ GV IT++K KK   ++SY ++
Sbjct:  230 RLVSVGGNICPCGGTHVKSTKELGGVEITRIKTKKNVTKISYRIS 274          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: tRNA_SAD (domain-containing protein n=1 Tax=Janibacter sp. YB324 TaxID=2761047 RepID=A0A7G7HSS4_9MICO)

HSP 1 Score: 54.3 bits (129), Expect = 7.010e-7
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   65 AAATKYGA-----ATRIVTVAGLSC-PCGGTHVRSTREMEGVRITKVKAKKGTLRVSYT 117
            AAA  +GA       R VT+ GL   PCGGTHVR+T ++ G++IT+V+ KKG L++SYT
Sbjct:   44 AAALPFGAEVDAEGVRRVTIEGLQTDPCGGTHVRTTADLTGIQITRVRTKKGQLKLSYT 102          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Hypothetical (protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DXT9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.290e-6
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0
Query:   75 RIVTVAGLSCPCGGTHVRSTREMEGVR--ITKVKAKKGTLRVSY 116
            RIVTVAG +CPCGGTHVRST++++  +  +  +K+KKG +RV Y
Sbjct:   53 RIVTVAGWACPCGGTHVRSTKDLKQRQWGVVGIKSKKGVVRVKY 96          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Threonyl (and Alanyl tRNA synthetase second additional domain-containing protein n=2 Tax=Janibacter indicus TaxID=857417 RepID=A0A1W1YJ62_9MICO)

HSP 1 Score: 53.5 bits (127), Expect = 2.730e-6
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   65 AAATKYGA-----ATRIVTVAGLSC-PCGGTHVRSTREMEGVRITKVKAKKGTLRVSYT 117
            AAA  +GA       R VT+ GL   PCGGTHVR+T ++ G++IT+V+ KKG L++SYT
Sbjct:   78 AAALPFGAEVDAEGVRRVTIEGLQTDPCGGTHVRTTADLTGLQITRVRTKKGQLKLSYT 136          
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Match: Threonine/alanine (tRNA ligase subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVN5_ACACA)

HSP 1 Score: 55.1 bits (131), Expect = 2.960e-6
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   75 RIVTV-AGLSCPCGGTHVRSTREMEGVRITKVKAKKGTLRVSYTL 118
            R+VTV A L CPCGGTHV++T E+  + I K+ AKKG +R+SYTL
Sbjct:  218 RVVTVCAPLGCPCGGTHVQNTGEIGRIAIPKMSAKKGVVRISYTL 262          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10574.523.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Similar1.360e-6696.00to ATP binding / alanine-tRNA ligase n=1 Tax=Ectoc... [more]
tRNA_SAD1.950e-5390.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Alanyl-tRNA4.240e-1268.89editing protein AlaX-M-like protein n=1 Tax=Tribon... [more]
Hypothetical8.080e-1065.96protein n=3 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical7.730e-858.70protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
AA_TRNA_LIGASE_II_ALA1.860e-753.33domain-containing protein n=4 Tax=Monodopsidaceae ... [more]
tRNA_SAD7.010e-750.85domain-containing protein n=1 Tax=Janibacter sp. Y... [more]
Hypothetical1.290e-656.82protein n=1 Tax=Thalassionema nitzschioides TaxID=... [more]
Threonyl2.730e-650.85and Alanyl tRNA synthetase second additional domai... [more]
Threonine/alanine2.960e-660.00tRNA ligase subfamily protein n=1 Tax=Acanthamoeba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 74..115
e-value: 1.8E-5
score: 34.2
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 75..113
e-value: 4.5E-6
score: 26.7
NoneNo IPR availableGENE3D3.30.980.10coord: 39..124
e-value: 3.7E-11
score: 45.3
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 69..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10574contigEcto-sp9_F_contig10574:2299..3196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10574.523.1mRNA_Ecto-sp9_F_contig10574.523.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10574 161..3928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10574.523.1 ID=prot_Ecto-sp9_F_contig10574.523.1|Name=mRNA_Ecto-sp9_F_contig10574.523.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=138bp
MANMETVVKMADQEHGDEAPSSSSSSAQEGPARGAAGRGREEVAVVAERG
GRGGRGKVPASSTAAAATKYGAATRIVTVAGLSCPCGGTHVRSTREMEGV
RITKVKAKKGTLRVSYTLAPSSSPSSSSPSSSSARPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012947tRNA_SAD
IPR018163Thr/Ala-tRNA-synth_IIc_edit