prot_Ecto-sp9_F_contig10534.499.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10534.499.1
Unique Nameprot_Ecto-sp9_F_contig10534.499.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10534.499.1 vs.
Match: Putative (2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 4.440e-45
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0 
Query:    2 SGGGSGEDISSWTARWREMYGIGKATDDPSSSLDKVVGVPRQARARIAHILYDHGSLVREVEESFGIEIIPVPRTLEQAKLPRIRR 87
            SGGGSGED+SSWTARWRE+YG GKATD+P SSLDKVVGVPRQARARI HILYDHGSLVREVEESFG+EIIPVPRTLEQAKLPRIRR
Sbjct: 1181 SGGGSGEDVSSWTARWRELYGTGKATDEPPSSLDKVVGVPRQARARIVHILYDHGSLVREVEESFGMEIIPVPRTLEQAKLPRIRR 1266
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BLAST of mRNA_Ecto-sp9_F_contig10534.499.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT9_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 3.860e-44
Identity = 82/86 (95.35%), Postives = 83/86 (96.51%), Query Frame = 0 
Query:    2 SGGGSGEDISSWTARWREMYGIGKATDDPSSSLDKVVGVPRQARARIAHILYDHGSLVREVEESFGIEIIPVPRTLEQAKLPRIRR 87
            SGGGSG DISSWTARWREMYGIGKATD+PSSSLDKVVGVPRQARARI HILYDH SLVREVEESFGIEIIPVPRTLEQAKLPRIRR
Sbjct:  441 SGGGSG-DISSWTARWREMYGIGKATDEPSSSLDKVVGVPRQARARIVHILYDHDSLVREVEESFGIEIIPVPRTLEQAKLPRIRR 525
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10534.499.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Putative4.440e-4591.862-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Ta... [more]
Uncharacterized3.860e-4495.35protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10534contigEcto-sp9_F_contig10534:2008..2831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10534.499.1mRNA_Ecto-sp9_F_contig10534.499.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10534 2008..2831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10534.499.1 ID=prot_Ecto-sp9_F_contig10534.499.1|Name=mRNA_Ecto-sp9_F_contig10534.499.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=93bp
CSGGGSGEDISSWTARWREMYGIGKATDDPSSSLDKVVGVPRQARARIAH
ILYDHGSLVREVEESFGIEIIPVPRTLEQAKLPRIRRVRMGA*
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