prot_Ecto-sp9_F_contig10465.440.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10465.440.1
Unique Nameprot_Ecto-sp9_F_contig10465.440.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length174
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 7.220e-87
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 0 
Query:    5 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHE R +
Sbjct:  159 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVS 325
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC21_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.580e-72
Identity = 141/167 (84.43%), Postives = 147/167 (88.02%), Query Frame = 0 
Query:    5 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            Q+SILTSSGDSTCI WDVEMGV   HFTDH GDVMSVSILP V          XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDGK+FGTGSDDSSCRLFDMRCYGE NYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVT++TG+PAYQLAGHE R +
Sbjct:  161 QDSILTSSGDSTCIFWDVEMGVAKQHFTDHMGDVMSVSILPHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFFPDGKSFGTGSDDSSCRLFDMRCYGEVNYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTSNTGMPAYQLAGHENRVS 327
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KDD3_HETAK)

HSP 1 Score: 196 bits (497), Expect = 8.220e-59
Identity = 123/169 (72.78%), Postives = 138/169 (81.66%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            L + SI+TSSGDSTCIIWDV  G    HFTDH GDVMSV++    +KN+FVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXX   FPDG AFGTGSDDSSCR+FDMRCYGE N FGND+ILCGITSV+FS+SGRLLFAGYDDYN YVWD   +     ++L GH+ R +
Sbjct:  156 LDEASIITSSGDSTCIIWDVNRGEAREHFTDHQGDVMSVAVSDQ-NKNIFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMFPDGFAFGTGSDDSSCRMFDMRCYGEVNQFGNDRILCGITSVSFSKSGRLLFAGYDDYNSYVWDTLKNDPSETFKLQGHDNRVS 323
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Z757_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.390e-56
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  167 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.030e-53
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  522 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 689
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HG74_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.370e-52
Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL-AGHEVRAT 171
            L +  ILTSSGDSTCI WD+  G     F+DH GDVMS+++ PS D N+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXX    +FPDGKAFGTGSDDS+CRLFDMRCYGE N FGND+ILCGITSV FS+SGRLLFAGYDDYN  VWDV ++    A+QL   HE R +
Sbjct:  161 LDEGRILTSSGDSTCIHWDINSGEVLKTFSDHKGDVMSLAVNPS-DSNIFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVEWFPDGKAFGTGSDDSTCRLFDMRCYGEVNRFGNDRILCGITSVGFSKSGRLLFAGYDDYNTIVWDVLSTGKQQAFQLHQPHENRVS 329
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4C7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.770e-51
Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 163
            L +  ILT+SGDSTCI WD+E G     F+DH GDVMS+S  P+ +KN+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXXXX  FFPDG AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD   +    A+QL
Sbjct:  161 LDESQILTASGDSTCIHWDIESGEVLNTFSDHKGDVMSLSTCPT-NKNLFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFFPDGNAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYGWDTLGNGKNYAFQL 320
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Guanine (nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6F1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.990e-50
Identity = 89/173 (51.45%), Postives = 109/173 (63.01%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTN-STGIPAYQL---AGHEVRAT 171
            +  ++ILTSSGDSTCI WD+E G   + FTDH GDVMSV++ P+ D+N+FVSGSC                             FFP+G  FGTGSDDSSCR+FD+RCY E N F +D+ILCGITSVAFS+SGRLL AGYDDY  +VWD    +   PA+      GHE R +
Sbjct:  153 IGSQNILTSSGDSTCIYWDIERGEPLSSFTDHNGDVMSVAVHPT-DRNLFVSGSCDATSKLFDIRQQGCVATFVGHESDINAVNFFPNGMCFGTGSDDSSCRMFDLRCYQEVNTFMSDRILCGITSVAFSQSGRLLLAGYDDYMTHVWDALKPNASSPAFSTDKNQGHENRVS 324
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40 (repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP31_9ARCH)

HSP 1 Score: 164 bits (414), Expect = 2.090e-48
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 0 
Query:   18 IIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 171
            ++WD+E+G +   F DH  DVMS+SILP+VD+N+FVSGSC      XXXXXXXXXXXXXXXXXXXXXX  FPDGK  GTGSDD++CR FD+R  GE + F +D I+CGITSV FSRSGR+LFAGYDDYNC  WDV  ST    YQL GHE R +
Sbjct:    1 MLWDIELGQSKQTFADHEADVMSLSILPTVDQNLFVSGSCDRTAKVXXXXXXXXXXXXXXXXXXXXXXRLFPDGKGIGTGSDDTTCRFFDIRSCGEVSQFRSDNIVCGITSVTFSRSGRILFAGYDDYNCLGWDVLGSTDKHHYQLQGHENRVS 154
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4N3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.090e-48
Identity = 114/161 (70.81%), Postives = 130/161 (80.75%), Query Frame = 0 
Query:    3 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 163
            L +  ILTSSGDSTCI WD+E G     F+DH GDVMS++I P+ + ++FV    XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFP G AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD  ++    A+QL
Sbjct:  160 LDEGQILTSSGDSTCIHWDIESGEVLKTFSDHKGDVMSLAISPT-NNSLFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPGGHAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYSWDTLSNGKNHAFQL 319
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized7.220e-8796.41protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0... [more]
WD40-repeat-containing3.580e-7284.43domain protein n=1 Tax=Tribonema minus TaxID=30337... [more]
Hypothetical8.220e-5972.78protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized1.390e-5672.19protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A... [more]
Uncharacterized1.030e-5372.19protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
Hypothetical1.370e-5270.00protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical1.770e-5172.67protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]
Guanine2.990e-5051.45nucleotide-binding protein subunit beta-1 n=1 Tax=... [more]
WD402.090e-4865.58repeat domain-containing protein n=1 Tax=archaeon ... [more]
Hypothetical4.090e-4870.81protein n=2 Tax=Pseudictyota dubia TaxID=2749911 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 52..66
score: 37.21
coord: 8..22
score: 33.4
coord: 94..108
score: 27.67
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 109..151
e-value: 0.15
score: 21.2
coord: 24..65
e-value: 0.0025
score: 27.1
coord: 68..107
e-value: 1.4E-9
score: 47.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 125..151
e-value: 5.0E-5
score: 24.0
coord: 27..65
e-value: 0.011
score: 16.6
coord: 69..107
e-value: 7.8E-7
score: 29.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 75..109
score: 11.645
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 31..74
score: 12.413
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 126..160
score: 9.239
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..173
e-value: 2.6E-56
score: 192.7
IPR016346Guanine nucleotide-binding protein, beta subunitPANTHERPTHR19850GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETAcoord: 5..170
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 8..22
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 138..152
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..173
score: 28.528
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10465contigEcto-sp9_F_contig10465:277..3884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10465.440.1mRNA_Ecto-sp9_F_contig10465.440.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10465 277..3884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10465.440.1 ID=prot_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=174bp
MELAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKN
VFVSGSCDSLAKVWDIREGKCVQTFQGHESDINSVMFFPDGKAFGTGSDD
SSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVW
DVTNSTGIPAYQLAGHEVRATQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR016346Guanine_nucleotide-bd_bsu
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf