prot_Ecto-sp9_F_contig10409.401.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10409.401.1
Unique Nameprot_Ecto-sp9_F_contig10409.401.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTA9_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.070e-33
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR
Sbjct:   71 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 133          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VL38_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.140e-19
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 0
Query:    2 AAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            A A+PGD    ++VVGG  NFL IYN ++TGR+LLSWVPQ QG+ AL+P++ +TDP+LN FR
Sbjct:   73 AMAIPGDGIAEQIVVGGFANFLQIYNFILTGRILLSWVPQAQGIGALQPLFAITDPFLNLFR 134          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: YggT (family protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLA7_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 2.150e-19
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    2 AAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            A A+PG+    +V VGG  NFLSIYNL+IT R+LLSW PQ QGV AL+PVY +TDP+LN FR
Sbjct:   62 AMAIPGNGIAEQVFVGGFSNFLSIYNLIITARILLSWFPQAQGVAALQPVYAITDPFLNLFR 123          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCS8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.300e-19
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    2 AAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            A A+PG     +V VGG  NFLSIYNL+ITGR+LLSW PQ QGV  L+PV+ +TDPYLN FR
Sbjct:   74 AMAIPGYGIAEQVFVGGFANFLSIYNLIITGRILLSWFPQAQGVAVLQPVFAITDPYLNLFR 135          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGH8_CYCTE)

HSP 1 Score: 83.2 bits (204), Expect = 8.060e-19
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            +A A+PG+  T ++ VGG  NFLSIYN++IT R+LLSW PQ QG+ AL+P++ +TDP+LN FR
Sbjct:   18 LAMAIPGNGVTEQIFVGGFANFLSIYNIVITARILLSWFPQSQGIGALQPIFAVTDPFLNLFR 80          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G073_PHATC)

HSP 1 Score: 84.7 bits (208), Expect = 1.310e-18
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    2 AAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            A A+PG     +V VGG LNFLSIYN++IT R+LLSW PQ QGV  L+PVY +TDPYLN FR
Sbjct:  104 AMAIPGYGVAEQVFVGGFLNFLSIYNIVITARILLSWFPQAQGVALLQPVYAITDPYLNIFR 165          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MRY2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.720e-18
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            +A A+PG     +V VGG  NFLSIYN +IT R+LLSW PQ QGV AL+PVY +TDPYLN FR
Sbjct:  104 MAMAIPGYGVAEQVFVGGFANFLSIYNFIITARILLSWFPQAQGVGALQPVYAITDPYLNLFR 166          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z260_TRICV)

HSP 1 Score: 82.4 bits (202), Expect = 3.860e-18
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    1 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            +A A+PG     +V VGG  NFL IYN +IT R+LLSW PQ QG+ AL+PVY +TDPYLN FR
Sbjct:   71 LAMAIPGYGVAEQVFVGGFANFLQIYNFIITARILLSWFPQAQGIGALQPVYAITDPYLNLFR 133          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAT7_FISSO)

HSP 1 Score: 85.9 bits (211), Expect = 4.340e-18
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 0
Query:    2 AAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            A A+PG+    +V VGG  NFLSIYNL+IT R+LLSW PQ QGV AL+PVY +TDP+LN FR
Sbjct:   62 AMAIPGNGIAEQVFVGGFSNFLSIYNLIITARILLSWFPQAQGVAALQPVYAITDPFLNLFR 123          
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RQ89_THAOC)

HSP 1 Score: 85.9 bits (211), Expect = 4.370e-18
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEPVYLLTDPYLNAFR 63
            +A A+PG+S   +VVVGG  NF+SIYN +IT R+LLSW PQ QG+ AL+PVY +TDPYLN FR
Sbjct:   69 LAIAIPGNSVAEQVVVGGFGNFISIYNTVITARILLSWFPQAQGIGALQPVYQITDPYLNLFR 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10409.401.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.070e-33100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTA9... [more]
Hypothetical2.140e-1959.68protein n=1 Tax=Grammatophora oceanica TaxID=21045... [more]
YggT2.150e-1964.52family protein n=1 Tax=Fistulifera solaris TaxID=1... [more]
Hypothetical3.300e-1964.52protein n=1 Tax=Amphiprora paludosa TaxID=265537 R... [more]
Hypothetical8.060e-1957.14protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Predicted1.310e-1864.52protein n=1 Tax=Phaeodactylum tricornutum (strain ... [more]
Hypothetical1.720e-1863.49protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical3.860e-1860.32protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Diphthine--ammonia4.340e-1864.52ligase n=1 Tax=Fistulifera solaris TaxID=1519565 R... [more]
Uncharacterized4.370e-1863.49protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003425CCB3/YggTPFAMPF02325YGGTcoord: 22..63
e-value: 4.0E-7
score: 30.4
IPR003425CCB3/YggTPANTHERPTHR33219FAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePANTHERPTHR33219:SF1YLMG HOMOLOG PROTEIN 2, CHLOROPLASTICcoord: 1..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..36
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10409contigEcto-sp9_F_contig10409:3033..3958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10409.401.1mRNA_Ecto-sp9_F_contig10409.401.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10409 3033..3958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10409.401.1 ID=prot_Ecto-sp9_F_contig10409.401.1|Name=mRNA_Ecto-sp9_F_contig10409.401.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=63bp
VAAALPGDSFTSEVVVGGVLNFLSIYNLLITGRVLLSWVPQLQGVQALEP
VYLLTDPYLNAFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003425CCB3/YggT