prot_Ecto-sp9_F_contig10392.383.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10392.383.1
Unique Nameprot_Ecto-sp9_F_contig10392.383.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length114
Homology
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ1_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 9.760e-54
Identity = 91/113 (80.53%), Postives = 95/113 (84.07%), Query Frame = 0
Query:    1 MISKSKTRKARKRRPRLRRSVRHCGRSHLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAHQG 113
            MI KSKTR+ARKR P LRRS       HLLVAT MSA  V IVESNRLVEFPS   C WNDLPHPAQFA+IFLMLALLFGVHRIFGKLD+AAYARLSRAVTAW+NERRHAHQG
Sbjct:    1 MIRKSKTREARKRPPALRRS-------HLLVATVMSATTVKIVESNRLVEFPSVFRCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDDAAYARLSRAVTAWINERRHAHQG 106          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G968_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 2.420e-51
Identity = 89/100 (89.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:    1 MISKSKTRKARKRRPRLRRSVRHCGRSHLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAV 100
            MISKSKTRKARKRRP LRR      RSHLLVAT MSAMIVGIVESNRLVEFPSGV+CTWNDLPHPAQFAVIFLMLALLFGVH+IFGKLD+AAYARLSRAV
Sbjct:    1 MISKSKTRKARKRRPGLRR------RSHLLVATAMSAMIVGIVESNRLVEFPSGVMCTWNDLPHPAQFAVIFLMLALLFGVHQIFGKLDSAAYARLSRAV 94          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU60_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.280e-29
Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 0
Query:   28 HLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAHQ 112
            H LV   +SAM+VG+ ES +LVEF SG  C W DLPHP QFAV+ +M AL FG++RIFGKLD AAYARLSRAVTAW++E+R  H+
Sbjct:  138 HFLVLV-ISAMVVGVAES-KLVEFQSGFKCMWYDLPHPVQFAVLLMMPALFFGINRIFGKLDKAAYARLSRAVTAWMDEKRQVHR 220          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYN8_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 6.390e-29
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 0
Query:   28 HLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAHQ 112
            H LV  T SAM+VG+ ES +LVEF SG  C W DLPHP QFAV+ +M AL FG++ IFGKLD  AYARLSRAVTAW++E+R  H+
Sbjct:   47 HFLVLVT-SAMVVGVAES-KLVEFRSGFKCIWYDLPHPVQFAVLLMMPALFFGINWIFGKLDKVAYARLSRAVTAWMDEKRQLHR 129          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G956_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 5.670e-27
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0
Query:   35 MSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAHQ 112
            MS  +VG+ ESN LV+ PSG  C W +L HP QFAV+ +M AL  GV+R+FG LD AAYARLSRAV+AW+NE+R   Q
Sbjct:    1 MSVTVVGVAESNMLVDLPSGFKCMWYNLSHPVQFAVLLVMPALFLGVNRMFGMLDKAAYARLSRAVSAWMNEKRQVDQ 78          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK72_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.010e-23
Identity = 53/73 (72.60%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 MISKSKTRKARKRRPRLRRSVRHCGRSHLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFL 73
            MISKSKTR+ARKRRP LRRS       HLLVA  MSAM V IVESNRLVEFPSG  C W +LPHP QFA+IFL
Sbjct:   37 MISKSKTREARKRRPALRRS-------HLLVAIAMSAMTVRIVESNRLVEFPSGARCMWKNLPHPVQFAIIFL 102          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F6_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 6.250e-23
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   35 MSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRH 109
            +SA+ V +VE  RL+E PSGV C WNDLPH  QFA++FLML +L+GV+R+F K D A Y+RL+ A    + ERRH
Sbjct:   18 VSAIQVDLVEGKRLIELPSGVRCMWNDLPHGLQFAILFLMLGILYGVNRLFDKADEAMYSRLTCATAELLRERRH 92          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.500e-20
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    4 KSKTRKARKRRPRLRRSVRHC-GRS---HLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAH 111
            KS+TR+  + +  LR  VR   GRS      +   +SA+ V +VE   L+EFP    C WNDLPH  QFA++FLML +L+GV+R+F K D A + RL+ A    +NERRH H
Sbjct:   31 KSETRQLSRNKAALRPFVRSSTGRSLGGRRAILALVSAVHVDLVEGKWLIEFPPRFRCIWNDLPHGLQFAILFLMLGVLYGVNRLFDKADQAMHTRLTCATARLLNERRHHH 142          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ82_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.730e-20
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   18 RRSVRHCGRS----HLLVATT--------MSAMI----VGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAH 111
            +R +RH  R     H LV ++        M A+I    V +VE   L+EFPSG  C WNDLPH  QFA++ LML +L+GV+R+F K D A Y RL+ A    +NERR  H
Sbjct:   31 KREIRHMSRKKAALHTLVRSSAGLGGRRAMLALISVAHVDVVEGKWLIEFPSGFRCMWNDLPHGLQFAILLLMLGILYGVNRLFDKADEAIYTRLTCATAGLLNERRLHH 140          
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9J2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 5.200e-20
Identity = 37/86 (43.02%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   27 SHLLVATTMSAMIVGIVESNRLVEFPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAVTAWVNERRHAHQ 112
            S  ++  T++A+  G+V+ + LV+ PSG  C W +L HPAQFA++FLM+ +++ ++R+F ++D   YARLS A  AW++E RH+ Q
Sbjct:  123 SRRILLATIAALNAGLVDGSLLVDLPSGFKCAWYNLEHPAQFAILFLMVGVVYFINRLFNEVDKVMYARLSCATEAWMDEIRHSRQ 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10392.383.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
Uncharacterized9.760e-5480.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.420e-5189.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.280e-2964.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.390e-2963.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.670e-2760.26protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.010e-2372.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.250e-2356.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.500e-2045.54protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Uncharacterized3.730e-2044.55protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.200e-2043.02protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..68
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10392contigEcto-sp9_F_contig10392:681..2547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10392.383.1mRNA_Ecto-sp9_F_contig10392.383.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10392 78..4231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10392.383.1 ID=prot_Ecto-sp9_F_contig10392.383.1|Name=mRNA_Ecto-sp9_F_contig10392.383.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=114bp
MISKSKTRKARKRRPRLRRSVRHCGRSHLLVATTMSAMIVGIVESNRLVE
FPSGVVCTWNDLPHPAQFAVIFLMLALLFGVHRIFGKLDNAAYARLSRAV
TAWVNERRHAHQG*
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