prot_Ecto-sp9_F_contig1034.341.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1034.341.1
Unique Nameprot_Ecto-sp9_F_contig1034.341.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length260
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1034.341.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ74_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 2.400e-115
Identity = 191/259 (73.75%), Postives = 195/259 (75.29%), Query Frame = 0 
Query:    1 MNALAVLILGLHATTAFFTSAGPHSRSTAAAGVHSAKAAISTSRVDTSRMLAGTGTGFFESIFGGQKAKLLENTWQTKEKNNSGETARLSEELFDFLTAEGAKPDDVAVMQKIEELEAAPGVSFNKDYLYDGPWRVLWKTNTAWQRYFDPLKSVANNRAYQWYKEDGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYEVNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQTKADEVVPV 259
            MNALAVL LGLHAT AF TSAGPHSRST AAGVHSAKAAISTSR D SR+LA TGTGFFES+FGGQK         TKE+NNSGETARLSEELFDFLTAEGAKPDDVAVM+KIEELE                                                DGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYEVNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQTKADEVVPV
Sbjct:    1 MNALAVLTLGLHATAAFVTSAGPHSRSTTAAGVHSAKAAISTSRADASRILASTGTGFFESLFGGQK---------TKEQNNSGETARLSEELFDFLTAEGAKPDDVAVMEKIEELE------------------------------------------------DGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYEVNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQTKADEVVPV 202
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1034.341.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized2.400e-11573.75protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ74... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.753

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1034contigEcto-sp9_F_contig1034:5257..9250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1034.341.1mRNA_Ecto-sp9_F_contig1034.341.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1034 5218..9669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1034.341.1 ID=prot_Ecto-sp9_F_contig1034.341.1|Name=mRNA_Ecto-sp9_F_contig1034.341.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=260bp
MNALAVLILGLHATTAFFTSAGPHSRSTAAAGVHSAKAAISTSRVDTSRM
LAGTGTGFFESIFGGQKAKLLENTWQTKEKNNSGETARLSEELFDFLTAE
GAKPDDVAVMQKIEELEAAPGVSFNKDYLYDGPWRVLWKTNTAWQRYFDP
LKSVANNRAYQWYKEDGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYE
VNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQ
TKADEVVPV*
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