prot_Ecto-sp9_F_contig10321.327.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10321.327.1
Unique Nameprot_Ecto-sp9_F_contig10321.327.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp9_F_contig10321.327.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.810e-27
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0
Query:    3 SVGDLSADVGAKVXXXXXXXXXXXXXXX-----------AKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVPDVTAEASVPDVSGSLPDISV 93
            SVG LSADVGA  XXXXXXXXXXXXXXX           A AP +PSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVPDV+AEASVPDVSG++PD+S+
Sbjct: 3067 SVGGLSADVGATXXXXXXXXXXXXXXXXXXXXXXXXXXSATAPGVPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVPDVSAEASVPDVSGAVPDVSL 3168          
BLAST of mRNA_Ecto-sp9_F_contig10321.327.1 vs.
Match: Similar (to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB94_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.370e-20
Identity = 72/93 (77.42%), Postives = 77/93 (82.80%), Query Frame = 0
Query:    4 VGDLSADVGAKVXXXXXXXXXXXXXXX-----------AKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVPDVTA-EASVPDV 84
            VGDLSADVGAKVXXXXXXXXXXXXXXX           AKAPDM SVEVKKPK+GLFGGLSFKKPSGKTSIEVPD  V+VPDV+A + +VPDV
Sbjct: 3695 VGDLSADVGAKVXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPDMSSVEVKKPKRGLFGGLSFKKPSGKTSIEVPDADVTVPDVSASDXAVPDV 3787          
BLAST of mRNA_Ecto-sp9_F_contig10321.327.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.030e-9
Identity = 62/106 (58.49%), Postives = 70/106 (66.04%), Query Frame = 0
Query:    3 SVGDLSADVGAKVXXXXXXXXXXXXXXX-----------AKAPDMPSVEVKKPKKGLFGGLSFKKPSGKTSIEVPDVGVSVPDVTA----EASVPDVSGSLPDISV 93
            SVGDLSADVGAK XXXXXXXXXXXXXXX           AKAP + SVEV+KPKK + GGLS KKPSGK SI VPD+   +P +      E S   VS + PD+ V
Sbjct:  650 SVGDLSADVGAKAXXXXXXXXXXXXXXXXXXXXXXXXXSAKAPGVKSVEVRKPKKDVLGGLSLKKPSGKISIGVPDMP-EMPSLEGGAGGELSPSGVSVTAPDVQV 754          
BLAST of mRNA_Ecto-sp9_F_contig10321.327.1 vs.
Match: Similar (to AHNAK nucleoprotein isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV2_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.480e-5
Identity = 32/55 (58.18%), Postives = 37/55 (67.27%), Query Frame = 0
Query:   38 SVEVKKPKKGLFGGLSFKKPS---GKTSIEVPDVGVSVPDVTAEASVPDVSGSLP 89
            S E KKPK+GLFGGLS KK S   GK  +EVP+V  ++PDV A A   D  GSLP
Sbjct:  307 SAEAKKPKRGLFGGLSLKKKSSSKGKGKLEVPEV--ALPDVLAVA---DTGGSLP 356          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10321.327.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized5.810e-2778.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Similar2.370e-2077.42to AHNAK nucleoprotein n=1 Tax=Ectocarpus siliculo... [more]
Protein1.030e-958.49kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Similar5.480e-558.18to AHNAK nucleoprotein isoform 1 n=1 Tax=Ectocarpu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10321contigEcto-sp9_F_contig10321:344..986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10321.327.1mRNA_Ecto-sp9_F_contig10321.327.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10321 344..1006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10321.327.1 ID=prot_Ecto-sp9_F_contig10321.327.1|Name=mRNA_Ecto-sp9_F_contig10321.327.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
MPSVGDLSADVGAKVGELSADVGGKVGELSAKAPDMPSVEVKKPKKGLFG
GLSFKKPSGKTSIEVPDVGVSVPDVTAEASVPDVSGSLPDISVPDVTVAA
PDVGADVSVPDVSGSIKV
back to top