prot_Ecto-sp9_F_contig10310.321.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10310.321.1
Unique Nameprot_Ecto-sp9_F_contig10310.321.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10310.321.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2F5_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.340e-22
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0 
Query:    1 MSFNGRRSPGNVSRGSISIITLLFALPKLLLLPTLAGAFFAPIGVLSSSAARLPS 55
            MSFNGRRSPG+VSRGSISIITLLFALPKLLLLPTLAGAFFAPIGVLSSSAAR+PS
Sbjct:    1 MSFNGRRSPGSVSRGSISIITLLFALPKLLLLPTLAGAFFAPIGVLSSSAARIPS 55
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10310.321.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized2.340e-2296.36protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..32
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10310contigEcto-sp9_F_contig10310:1032..3648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10310.321.1mRNA_Ecto-sp9_F_contig10310.321.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10310 1032..3679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10310.321.1 ID=prot_Ecto-sp9_F_contig10310.321.1|Name=mRNA_Ecto-sp9_F_contig10310.321.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=93bp
MSFNGRRSPGNVSRGSISIITLLFALPKLLLLPTLAGAFFAPIGVLSSSA
ARLPSSSASPQRGADRTQRPPHGGGLIFTLSGGASSSDSSSDM
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