prot_Ecto-sp9_F_contig10309.318.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10309.318.1
Unique Name	prot_Ecto-sp9_F_contig10309.318.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	118

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 3.900e-72
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            RFVHLSSAGVTRPGRPDLD+DTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGI ATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSL TPEASGLTFEVKSDLAFSTLW
Sbjct:  310 RFVHLSSAGVTRPGRPDLDMDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLW 427

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 5.060e-69
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            R VHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLS+LLTYKLKGEDVIRDSGI ATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSL TPEASGLTFEVKSDLAFSTLW
Sbjct:  493 RLVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSYLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLW 610

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC)

HSP 1 Score: 171 bits (432), Expect = 1.720e-48
Identity = 78/118 (66.10%), Postives = 98/118 (83.05%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            R + +SSAGVTRPGRP LD++ EPPAVRMN+ML  +LTYKLKGEDV+RDSG+  ++IRPCALTEEPAGAP+ +GQGD +KGKISR+D+A+L V+SL TP A+  T+E+K  L FS  W
Sbjct:  359 RLIQVSSAGVTRPGRPGLDLEKEPPAVRMNDMLGGILTYKLKGEDVVRDSGVTYSVIRPCALTEEPAGAPLQIGQGDEIKGKISREDVADLVVASLLTPAAANKTYEIKCTLPFSEPW 476

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Nadh:ubiquinone (oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT61_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.580e-45
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            RFVH+SSAGV RPGRP + ++ EPPAVRMN+ML  +LTYKLKGE+ IR SG+  TIIRPCALTEEPA  P+ V  GD +KGK+SRDD+A LAV +L  PEA+ LTFEVKS LAFS  W
Sbjct:  455 RFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSRDDVARLAVYALACPEATDLTFEVKSSLAFSQQW 572

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ATR9_AEGTS)

HSP 1 Score: 155 bits (393), Expect = 1.130e-44
Identity = 75/115 (65.22%), Postives = 93/115 (80.87%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFS 115
            RFVH+SSAGVTRP RP LD+  +PPAVRMN+ L  +LTYKLKGED+IR+SG+  TI+RPCALTEEPAGA +I  QGD + GKISR+++A L V++L +P A G TFEVKS + FS
Sbjct:  145 RFVHVSSAGVTRPERPGLDLSKQPPAVRMNKELGSILTYKLKGEDLIRESGVPYTIVRPCALTEEPAGADLIFEQGDNITGKISREEVARLCVAALASPSAVGKTFEVKSTVPFS 259

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: uncharacterized (protein At2g34460, chloroplastic-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E195D)

HSP 1 Score: 151 bits (381), Expect = 1.250e-44
Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 0

Query:    2 FVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFS 115
            FVH+SSAGVTRPGRP LD+  +PPAVR+N+ L  +LTYKLKGED+IR+SGI  TI+RPCAL+EEPAGA +I  QGD + GKISR+++A + +++L +P A   TFEVKS + FS
Sbjct:    2 FVHVSSAGVTRPGRPGLDLSKQPPAVRLNKELGFILTYKLKGEDLIRESGIPYTIVRPCALSEEPAGADLIFDQGDNITGKISREEVARICIAALGSPYACNKTFEVKSTIPFS 115

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: NAD(P)-bd_dom (domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A1R3L5G1_ASPOF)

HSP 1 Score: 153 bits (386), Expect = 1.750e-44
Identity = 72/115 (62.61%), Postives = 93/115 (80.87%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFS 115
            RFVH+SSAGVTRPGRP LD+  +PPAVR+N+ L  +LTYKLKGED+IR+SGI  TI+RPCAL+EEPAGA +I  QGD + GKISR+++A + +++L +P A   TFEVKS + FS
Sbjct:   71 RFVHVSSAGVTRPGRPGLDLSKQPPAVRLNKELGFILTYKLKGEDLIRESGIPYTIVRPCALSEEPAGADLIFDQGDNITGKISREEVARICIAALGSPYACNKTFEVKSTIPFS 185

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Putative (NAD(P)-binding domain-containing protein n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q4X2_ROSCH)

HSP 1 Score: 152 bits (383), Expect = 1.900e-44
Identity = 72/115 (62.61%), Postives = 94/115 (81.74%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFS 115
            RFVH+ SAGVTRP RP LD+  +PPAVR+N+ L  +LT+KLKGED+IR+SGI  TI+RPCALTEEPAGA +I  QGD + GKISR+++A++ V++L +P A+G TFEVKS + FS
Sbjct:   38 RFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVAQICVAALESPYATGKTFEVKSVIPFS 152

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Nadh:ubiquinone (oxidoreductase complex i intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQM7_NANGC)

HSP 1 Score: 163 bits (412), Expect = 3.030e-44
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0

Query:    1 RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            RFVH+SSAGV RPGRP + ++ EPPAVRMN+ML  +LTYKLKGE+ IR SG+  TIIRPCALTEEPA  P+ V  GD +KGK+SRDD+A LAV +L  PEA+ LTFEVKS LAFS  W
Sbjct:  455 RFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSRDDVARLAVYALACPEATDLTFEVKSSLAFSQQW 572

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BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Match: Hypothetical (protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U8L1_9CHLO)

HSP 1 Score: 160 bits (406), Expect = 5.250e-44
Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 0

Query:    2 FVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPEASGLTFEVKSDLAFSTLW 118
            +VH+SSAGVTRP RP +D+D EPPAV++N+ L  +L+YKLKGED++R++G+   I+RPCALTEEPAGA ++V QGD +KGKISR+D+AEL V+ L  PEAS  TFE+KS + FST W
Sbjct:  479 WVHVSSAGVTRPNRPGIDVDAEPPAVKLNDALGGILSYKLKGEDMVREAGMPFAIVRPCALTEEPAGAELLVDQGDTIKGKISREDVAELCVALLSQPEASSTTFEIKSTVPFSTPW 595

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10309.318.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	3.900e-72	97.46	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	5.060e-69	96.61	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.720e-48	66.10	protein n=2 Tax=Vitrella brassicaformis TaxID=1169...	[more]
Nadh:ubiquinone	4.580e-45	67.80	oxidoreductase complex i intermediate-associated p...	[more]
Uncharacterized	1.130e-44	65.22	protein n=1 Tax=Aegilops tauschii subsp. strangula...	[more]
uncharacterized	1.250e-44	62.28	protein At2g34460, chloroplastic-like n=1 Tax=Aspa...	[more]
NAD(P)-bd_dom	1.750e-44	62.61	domain-containing protein n=1 Tax=Asparagus offici...	[more]
Putative	1.900e-44	62.61	NAD(P)-binding domain-containing protein n=4 Tax=R...	[more]
Nadh:ubiquinone	3.030e-44	67.80	oxidoreductase complex i intermediate-associated p...	[more]
Hypothetical	5.250e-44	62.39	protein n=1 Tax=Picocystis salinarum TaxID=88271 R...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..115 e-value: 1.2E-21 score: 79.2
None	No IPR available	PANTHER	PTHR13194:SF19	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 1..116
IPR016040	NAD(P)-binding domain	PFAM	PF13460	NAD_binding_10	coord: 1..98 e-value: 1.6E-13 score: 50.9
IPR039131	Complex I intermediate-associated protein 30, mitochondrial	PANTHER	PTHR13194	COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30	coord: 1..116
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..114

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10309	contig	Ecto-sp9_F_contig10309:671..2406 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10309.318.1	mRNA_Ecto-sp9_F_contig10309.318.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10309 671..2406 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10309.318.1 ID=prot_Ecto-sp9_F_contig10309.318.1|Name=mRNA_Ecto-sp9_F_contig10309.318.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
RFVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSHLLTYKLKGEDVIRDS
GIAATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLFTPE
ASGLTFEVKSDLAFSTLW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR039131	NDUFAF1
IPR036291	NAD(P)-bd_dom_sf