prot_Ecto-sp9_F_contig10308.317.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10308.317.1
Unique Name	prot_Ecto-sp9_F_contig10308.317.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	113

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10308.317.1 vs.
Match: Putative (phospholipase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ2_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 5.000e-67
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0

Query:    1 MGAKTTAGDVNDKSDEMKSLAVSYMGVPLHFLASLVWAAVSRLLTMFRPREQTGAGFNKPVSPAPQQPLVRLNNLPQSEEYFINERGRVIHFRSYLPQSADEIKAVVLFSHG 112
            MGAKTTAGDVN KS+EMKSLAVSYMGVPLHFLASLVWAAVSRLLTMFRPREQTGAGFNKPVSPAPQQPLVRLNNLPQSEEYFINERGRVIHFRSYLPQSADEIKAVVLFSHG
Sbjct:    1 MGAKTTAGDVNGKSNEMKSLAVSYMGVPLHFLASLVWAAVSRLLTMFRPREQTGAGFNKPVSPAPQQPLVRLNNLPQSEEYFINERGRVIHFRSYLPQSADEIKAVVLFSHG 112

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10308.317.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10308.317.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Putative	5.000e-67	98.21	phospholipase n=2 Tax=Ectocarpus TaxID=2879 RepID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..112
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..40
None	No IPR available	TMHMM	TMhelix		coord: 20..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10308	contig	Ecto-sp9_F_contig10308:141..809 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10308.317.1	mRNA_Ecto-sp9_F_contig10308.317.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10308 13..1732 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10308.317.1 ID=prot_Ecto-sp9_F_contig10308.317.1|Name=mRNA_Ecto-sp9_F_contig10308.317.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=113bp
MGAKTTAGDVNDKSDEMKSLAVSYMGVPLHFLASLVWAAVSRLLTMFRPR
EQTGAGFNKPVSPAPQQPLVRLNNLPQSEEYFINERGRVIHFRSYLPQSA
DEIKAVVLFSHG*