prot_Ecto-sp9_F_contig10306.314.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10306.314.1
Unique Nameprot_Ecto-sp9_F_contig10306.314.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Chromatin (structure-remodeling complex subunit snf21-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYV4_PYTIN)

HSP 1 Score: 185 bits (470), Expect = 1.580e-55
Identity = 87/118 (73.73%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N+LNGILADEMGLGKTIQ+I+LL+Y+ E+K N+GPFLVVVPLSTLSNWVNEF +WAP   +V YKG P TR++I R+EM S Q+NVLLTTY+Y+MK
Sbjct:  116 LVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVFEIKHNHGPFLVVVPLSTLSNWVNEFKRWAPDLALVVYKGPPQTRKEIFRQEMASCQFNVLLTTYEYIMK 233          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4M1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.270e-54
Identity = 90/118 (76.27%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            LKGG LKEYQL GLQW+VSLYNNNLNGILADEMGLGKTIQTI+L+ YLME K+NNGPFLVVVPLSTLSNWVNEF+KWAP  + V YKG P  R+ + +E + SGQ NVLLTTY+Y+MK
Sbjct:  303 LKGGNLKEYQLTGLQWLVSLYNNNLNGILADEMGLGKTIQTISLVCYLMEYKQNNGPFLVVVPLSTLSNWVNEFNKWAPDVIKVVYKGIPDDRKRLYKEHVESGQLNVLLTTYEYIMK 420          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZW3_HETAK)

HSP 1 Score: 185 bits (470), Expect = 2.460e-53
Identity = 88/118 (74.58%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL GL W+V LYNNNLNGILADEMGLGKTIQTIALL +LMEVKR+NGPFLV VPLST+SNWVNEF +WAP  +VV YKG P+ R+ + REEM SGQYNV+LTTY+Y+++
Sbjct:   30 LVGGDLKEYQLAGLAWLVGLYNNNLNGILADEMGLGKTIQTIALLCHLMEVKRDNGPFLVCVPLSTMSNWVNEFVRWAPDIIVVCYKGGPAERKAVYREEMESGQYNVVLTTYEYIIR 147          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Chromatin (structure-remodeling complex subunit snf21 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUN3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.330e-53
Identity = 90/118 (76.27%), Postives = 101/118 (85.59%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N LNGILADEMGLGKTIQ+I+L++Y+ME K NNGPFLVVVPLSTLSNWVNEF KWAP   +V YKG P  RRDI R EM S Q+NVLLTTY+Y+MK
Sbjct:   51 LVGGDLKEYQLRGLQWMVSLYDNRLNGILADEMGLGKTIQSISLVTYIMEFKHNNGPFLVVVPLSTLSNWVNEFRKWAPDITLVVYKGHPQARRDIYRLEMASVQFNVLLTTYEYIMK 168          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Helicase (ATP-binding domain-containing protein (Fragment) n=1 Tax=Neotoma lepida TaxID=56216 RepID=A0A1A6H292_NEOLE)

HSP 1 Score: 176 bits (447), Expect = 9.170e-53
Identity = 84/118 (71.19%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L  GTLK YQLQGL+WMVSLYNNNLNGILADEMGLGKTIQTIAL++YLME KR NGP+L++VPLSTLSNW  EF KWAPS + ++YKGTP+ RR +   ++ SG++NVLLTTY+Y++K
Sbjct:  156 LINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLV-PQLRSGKFNVLLTTYEYIIK 272          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFG0_GLOUD)

HSP 1 Score: 187 bits (475), Expect = 1.000e-52
Identity = 87/118 (73.73%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N+LNGILADEMGLGKTIQ+I+LL+Y+ E+K N+GPFLVVVPLSTLSNWVNEF KWAP  ++V YKG P  R+D+ R+EM S Q+NVLLTTY+Y+MK
Sbjct:  343 LVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYITEIKHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVLVVYKGPPQVRKDLHRQEMASCQFNVLLTTYEYIMK 460          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1K8_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.150e-52
Identity = 87/118 (73.73%), Postives = 105/118 (88.98%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N+LNGILADEMGLGKTIQ+I+LL+Y+MEVK N+GPFLVVVPLSTLSNWVNEF KWAP  ++V YKG P  R+++ ++EM S Q+NVLLTTY+Y+MK
Sbjct:  379 LVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVMEVKHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVLVVYKGPPQARKELHKQEMASCQFNVLLTTYEYIMK 496          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5P4_HYAAE)

HSP 1 Score: 187 bits (474), Expect = 1.360e-52
Identity = 87/118 (73.73%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N+LNGILADEMGLGKTIQ+I+LL+Y+ EVK N+GPFLVVVPLSTLSNWVNEF KWAP  ++V YKG P  R+D+ ++EM S Q+NVLLTTY+Y+MK
Sbjct:  355 LVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVTEVKHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVIVVYKGPPQVRKDLHKQEMASCQFNVLLTTYEYIMK 472          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y6_PYTOL)

HSP 1 Score: 187 bits (474), Expect = 1.390e-52
Identity = 87/118 (73.73%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            L GG LKEYQL+GLQWMVSLY+N+LNGILADEMGLGKTIQ+I+LL+Y+ E+K N+GPFLVVVPLSTLSNWVNEF KWAP  ++V YKG P  R++I R+EM S Q+NVLLTTY+Y+MK
Sbjct:  518 LVGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYIFEIKHNHGPFLVVVPLSTLSNWVNEFKKWAPDLVLVVYKGPPQVRKEIHRQEMASCQFNVLLTTYEYIMK 635          
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V1F3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.140e-52
Identity = 82/112 (73.21%), Postives = 98/112 (87.50%), Query Frame = 0
Query:    7 KEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLMEVKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREEMGSGQYNVLLTTYDYVMK 118
            KEYQ+ GLQWMVSLYNN LNGILADEMGLGKTIQ I+L+ YLME K N GP+LV+VPLSTLSNWVNEF+KW PSA VV YKGTP+ RRD+ ++ + +GQ+NVLLTTY+YV++
Sbjct:    1 KEYQIAGLQWMVSLYNNKLNGILADEMGLGKTIQAISLIGYLMEFKENLGPYLVIVPLSTLSNWVNEFAKWVPSARVVAYKGTPAQRRDLFKDAIRNGQFNVLLTTYEYVIR 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10306.314.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Chromatin1.580e-5573.73structure-remodeling complex subunit snf21-like pr... [more]
Hypothetical1.270e-5476.27protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Hypothetical2.460e-5374.58protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Chromatin7.330e-5376.27structure-remodeling complex subunit snf21 (Fragme... [more]
Helicase9.170e-5371.19ATP-binding domain-containing protein (Fragment) n... [more]
Uncharacterized1.000e-5273.73protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized1.150e-5273.73protein (Fragment) n=1 Tax=Nothophytophthora sp. C... [more]
Uncharacterized1.360e-5273.73protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
Uncharacterized1.390e-5273.73protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical2.140e-5273.21protein (Fragment) n=1 Tax=Grammatophora oceanica ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 18..116
e-value: 1.2E-24
score: 86.7
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..118
e-value: 2.9E-48
score: 166.0
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 1..118
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..118
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 18..118
score: 14.847
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10306contigEcto-sp9_F_contig10306:9..1199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10306.314.1mRNA_Ecto-sp9_F_contig10306.314.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10306 9..1199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10306.314.1 ID=prot_Ecto-sp9_F_contig10306.314.1|Name=mRNA_Ecto-sp9_F_contig10306.314.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
LKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLME
VKRNNGPFLVVVPLSTLSNWVNEFSKWAPSALVVTYKGTPSTRRDIQREE
MGSGQYNVLLTTYDYVMK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase