prot_Ecto-sp9_F_contig1027.280.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1027.280.1
Unique Nameprot_Ecto-sp9_F_contig1027.280.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length133
Homology
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 2.130e-81
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
Query:    1 MTSTAARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAAGE 118
            MTSTAARQV RGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAAGE
Sbjct:    1 MTSTAARQVARGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAAGE 118          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.840e-29
Identity = 51/95 (53.68%), Postives = 63/95 (66.32%), Query Frame = 0
Query:   19 PPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEG 113
            PP AR      +L E  EL+WDD VAPE  +DFDAPH+S ++   WW GGL FFA +  +V LS PE +REA+PR AT+P  AFDP DLF  + G
Sbjct:   32 PPMARQPRPTQRLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLSYPEGRREALPRTATMPPAAFDPVDLFTGKRG 126          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA)

HSP 1 Score: 101 bits (252), Expect = 4.730e-25
Identity = 50/93 (53.76%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    5 AARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATL 97
            AA+Q    G  PP PPFARN     +L E+HEL+WDDGVAPE TIDFD+ H+S  E  AWW GGL FF G+       D ESK  AV R A +
Sbjct:   21 AAQQARSLGSSPPTPPFARNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGLFQFCKTIDMESKNPAVNRKADI 113          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZR7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.040e-24
Identity = 48/89 (53.93%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    5 AARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPR 93
            A R +  GG  PP PPFARN     +L E+HEL+WDDGVAPE TIDFD PH S  +  A W GG+ FF  +  +V L+DP SK  A PR
Sbjct:   35 AVRCMGGGGATPPLPPFARNLAPQEKLHESHELMWDDGVAPELTIDFDVPHYSGEKGLAMWLGGIAFFVTLYQVVKLTDPASKNPAAPR 123          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R2X0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.640e-22
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   18 QPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLP 98
            +PPF R       L E HEL+WDDGVA ET IDFDAPH+S SE FAWW GG  FF G+  +  L DP+++    PR  T+P
Sbjct:   44 RPPFIRTLAPQGSLHEEHELVWDDGVAAETCIDFDAPHISSSEGFAWWIGGFLFFLGVGTVALLRDPDAQNPTTPRGPTMP 124          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC)

HSP 1 Score: 94.0 bits (232), Expect = 6.620e-22
Identity = 49/98 (50.00%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    7 RQVIRGGGG------PPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLP 98
            R  +R GGG      PP  PF R    +  L E HELIWDD VA E  IDFDA  +   EAF WW GG  FF G+LGLV L+DP S    V +A T+P
Sbjct:   28 RSAVRAGGGAGHNPGPPMQPFKRTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALTDPASVNPCVNKAETMP 125          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHV7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.400e-21
Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    1 MTSTAARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATL 97
            + + + +  +RG   PP PPFAR      +L EN++ +WDDGVAPET +DFD  H+S  E  AWW GGL FF  +   V  +DPESK  AV R   +
Sbjct:   39 VATRSTQSSLRGDYTPPLPPFARIPAPTEKLVENNDAVWDDGVAPETALDFDCQHISSEEGLAWWLGGLGFFFSVYQFVKWTDPESKNPAVNRKMNM 135          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWZ0_THAPS)

HSP 1 Score: 92.4 bits (228), Expect = 2.150e-21
Identity = 48/92 (52.17%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    2 TSTAARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPR 93
            T+TA   + RGG  PP  PFAR  P   +L E ++ IWDDGVAPE T+DFD  H+S  E  A W GGL FFA +  +V  SDP+SK  AV R
Sbjct:   33 TTTA---LTRGGATPPLAPFARLPPESEKLVEQYDAIWDDGVAPEVTLDFDCQHISSGEGLAMWLGGLGFFATLYQVVKASDPQSKNPAVNR 121          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8H2_HYAAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.040e-20
Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    9 VIRGGGG--PPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAAGED 119
             +RGG    PP PPFAR K     L E  EL+W+DGV+PET IDFDAPH+   +A   W  GL FF  ++G+VTL  P+S R+AV R   LP   ++  ++ + E GE  G D
Sbjct:   11 AVRGGHAHRPPPPPFARLKAPAQPLHEEAELVWNDGVSPETLIDFDAPHIPKYQALRHWLCGLGFFVTLMGVVTLYGPDSWRQAVKRETCLPDLKWELGEIDEPE-GEMKGID 122          
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Match: Uncharacterized (protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZU03_PHYSP)

HSP 1 Score: 89.0 bits (219), Expect = 4.050e-20
Identity = 48/102 (47.06%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    1 MTSTAARQVIRGGGG----PPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLP 98
            ++    RQ +   GG    PP PPFAR K     L E  EL+W+DGVAPET IDFDAPH+   +A   W  GL  FA ++G+VTL +P+S R+A  R   LP
Sbjct:   14 LSVNVRRQALATRGGHAHRPPPPPFARIKEAAAPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRHWLYGLGAFATLMGVVTLYNPDSWRQASKRGNHLP 115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1027.280.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.130e-8199.15protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6... [more]
Uncharacterized7.840e-2953.68protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical4.730e-2553.76protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Hypothetical6.040e-2453.93protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Hypothetical1.640e-2253.09protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized6.620e-2250.00protein n=1 Tax=Nannochloropsis gaditana (strain C... [more]
Hypothetical1.400e-2145.36protein n=1 Tax=Pseudictyota dubia TaxID=2749911 R... [more]
Uncharacterized2.150e-2152.17protein n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
Uncharacterized2.040e-2046.02protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
Uncharacterized4.050e-2047.06protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4Z... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 62..81
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401FAMILY NOT NAMEDcoord: 11..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1027contigEcto-sp9_F_contig1027:8630..10742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1027.280.1mRNA_Ecto-sp9_F_contig1027.280.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1027 8630..10742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1027.280.1 ID=prot_Ecto-sp9_F_contig1027.280.1|Name=mRNA_Ecto-sp9_F_contig1027.280.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=133bp
MTSTAARQVIRGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTID
FDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPAT
AFDPRDLFKAEEGEAAGEDEEEEEEEEEEEDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038863Put_Complex_I_su8