prot_Ecto-sp9_F_contig10232.259.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10232.259.1
Unique Name	prot_Ecto-sp9_F_contig10232.259.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	101

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10232.259.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 3.650e-48
Identity = 97/101 (96.04%), Postives = 97/101 (96.04%), Query Frame = 0

Query:    1 MLAVAGRAAADVESVRRALVVAEEKMVGMQAEVDEAVQETDRLRAENAALEESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAPTNSPLETHHHRLPGEE 101
            ML VAGRAAADVESVRRALVVAEEKMVGMQAEVDEAVQETDRLRAENAAL ESLCEVADAMSKSLPTRDRVPLTETGPDSVSPA TNSPLET HHRLPGEE
Sbjct: 3064 MLVVAGRAAADVESVRRALVVAEEKMVGMQAEVDEAVQETDRLRAENAALGESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAATNSPLETPHHRLPGEE 3164

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BLAST of mRNA_Ecto-sp9_F_contig10232.259.1 vs.
Match: Methyl-accepting (transducer domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK6_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.100e-39
Identity = 89/111 (80.18%), Postives = 92/111 (82.88%), Query Frame = 0

Query:    1 MLAVAGRAAADVESVRRALVVAEEKMV-----------GMQAEVDEAVQETDRLRAENAALEESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAPTNSPLETHHHRLPGE 100
            MLAVAGRAAADVESVRRALVVAEEK+            G  AEVDEAV+ETDRLRAENA LEESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAPTNS LE  H+ LPGE
Sbjct: 1722 MLAVAGRAAADVESVRRALVVAEEKVRPTRDGMSRDSDGTTAEVDEAVRETDRLRAENATLEESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAPTNSSLENPHYPLPGE 1832

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10232.259.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10232.259.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	3.650e-48	96.04	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Methyl-accepting	2.100e-39	80.18	transducer domain-containing protein n=1 Tax=Ectoc...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10232	contig	Ecto-sp9_F_contig10232:2503..3711 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10232.259.1	mRNA_Ecto-sp9_F_contig10232.259.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10232 2503..3721 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10232.259.1 ID=prot_Ecto-sp9_F_contig10232.259.1|Name=mRNA_Ecto-sp9_F_contig10232.259.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=101bp
MLAVAGRAAADVESVRRALVVAEEKMVGMQAEVDEAVQETDRLRAENAAL
EESLCEVADAMSKSLPTRDRVPLTETGPDSVSPAPTNSPLETHHHRLPGE
E