prot_Ecto-sp9_F_contig1023.256.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1023.256.1
Unique Nameprot_Ecto-sp9_F_contig1023.256.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length258
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1023.256.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ23_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 4.140e-89
Identity = 196/218 (89.91%), Postives = 201/218 (92.20%), Query Frame = 0 
Query:    1 MFKRRSSKELSAKIGYDHVNGKASRNTSVPSLPSSTSATNNAVAPVASIPHPGGHLHHKQGSFSSGSSSYRKTTSMPSPEGDSGDDPSA-ERPSPLAALKPLPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVAEPPSKSLVIGEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKMDGTAVVEMAEIAGTFEGNLTVTKALKHC 217
            MF+RRSSKELSAKIGYDHVNGKAS+NTSV S+ SST A +NAVAPVASIP PGGHLHHKQGS S GSSS RKTT MPSPE DSG DPSA ERPSPLAALKPLPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VAEPPS SLVIGEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKM+GTAVVEMAEIAG FEGNLTVTKALK C
Sbjct:    1 MFRRRSSKELSAKIGYDHVNGKASKNTSVSSMSSSTPAASNAVAPVASIPPPGGHLHHKQGSCSPGSSSSRKTTGMPSPEADSGVDPSATERPSPLAALKPLPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VAEPPSNSLVIGEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKMEGTAVVEMAEIAGAFEGNLTVTKALKIC 216
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BLAST of mRNA_Ecto-sp9_F_contig1023.256.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS04_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.920e-6
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:  189 MDGTAVVEMAEIAGTFEGNLTVTKALKH 216
            M+GTAVVEMAEIAGTFEGNLT TKALKH
Sbjct:    1 MEGTAVVEMAEIAGTFEGNLTATKALKH 28
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1023.256.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.140e-8989.91protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.920e-692.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 149..214
e-value: 6.4E-8
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1023contigEcto-sp9_F_contig1023:22283..23417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1023.256.1mRNA_Ecto-sp9_F_contig1023.256.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1023 22283..23417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1023.256.1 ID=prot_Ecto-sp9_F_contig1023.256.1|Name=mRNA_Ecto-sp9_F_contig1023.256.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=258bp
MFKRRSSKELSAKIGYDHVNGKASRNTSVPSLPSSTSATNNAVAPVASIP
HPGGHLHHKQGSFSSGSSSYRKTTSMPSPEGDSGDDPSAERPSPLAALKP
LPPAEQQQQQQQQQQQVISTKAPSKANKSAATAAAAPKVVAEPPSKSLVI
GEGVLFEGATEGCAAAVVGGKLVGTVKSKRLEVTRAGKMDGTAVVEMAEI
AGTFEGNLTVTKALKHCFLLSHGVSSCCPAAPCRASSSLPTSRPRGVEMT
TKNCFKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B