prot_Ecto-sp9_F_contig10223.249.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10223.249.1
Unique Nameprot_Ecto-sp9_F_contig10223.249.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H8_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 1.790e-80
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 GQVVVSTKSGDGEATAATGGDVVRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 116
            GQVVV+TKSGDGEATAATGGDVVRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR
Sbjct:  154 GQVVVATKSGDGEATAATGGDVVRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 269          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M4_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.410e-73
Identity = 107/118 (90.68%), Postives = 109/118 (92.37%), Query Frame = 0
Query:    1 GQVVVSTKSGDGEATAATGGDV--VRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTLR 116
            GQV+V+  S DGE TAATGGDV  V  STATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCV GKHASYDDPPEGGDGAWRSPLTGTLR
Sbjct:   59 GQVIVAANSRDGEDTAATGGDVHLVSASTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVNGKHASYDDPPEGGDGAWRSPLTGTLR 176          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GZ08_VITBC)

HSP 1 Score: 115 bits (287), Expect = 2.030e-28
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0
Query:   31 TCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTG 113
            TCR CK+ F P+ N   +C YH G+FSGRLNR+NDVDTS LE+FWSCCGE D  HPGCV  +H S+D+  +     WRSP+TG
Sbjct:  264 TCRQCKRSFVPEHNHSLACCYHAGVFSGRLNRVNDVDTSDLEFFWSCCGEYDREHPGCVVTRHMSFDEADDAT--TWRSPMTG 344          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9F9_9ALVE)

HSP 1 Score: 108 bits (269), Expect = 2.180e-27
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 0
Query:   30 STCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRSPLTGTL 115
            STCR CK+ F    N +  C +HPG ++GRLNR+NDVDTS LE+FWSCCGE D  HPGC    H SYDD     +G   S LTG +
Sbjct:   92 STCRQCKKPFLKSQNAETGCVFHPGFYTGRLNRVNDVDTSDLEFFWSCCGEYDRGHPGCTNTHHVSYDD-----EGPTWSVLTGKI 172          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJI3_PORUM)

HSP 1 Score: 103 bits (257), Expect = 7.840e-26
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   32 CRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDD 98
            CR CKQQ++P+ N  GSC YH   + GRLNRI   +TSGLEYFW CCG+TD +  GCVK +H+SYDD
Sbjct:   89 CRQCKQQYDPEANEPGSCRYHGAQYRGRLNRIEPTETSGLEYFWHCCGDTDVNAEGCVKARHSSYDD 155          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLU8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.650e-23
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0
Query:   29 TSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGL-EYFWSCCGETDPSHPGCVKGKHASYDDPPEGGDGAWRS 109
            T TCR C +QFNP +N   +C++HPG+++GRL RI+D D SG  ++FWSCCG  +  HPGC    H S+DDPP    G W+S
Sbjct:   82 TKTCRACLKQFNPSENPPSACTFHPGIYTGRLARIDDTDPSGAKDFFWSCCGG-EREHPGCTHDHHRSFDDPP----GPWQS 158          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIL7_9RHOD)

HSP 1 Score: 94.0 bits (232), Expect = 1.590e-22
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   32 CRNCKQQFNPDDNVDGSCSYHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDD 98
            CR CK Q++P  N   SC  H G +SGRLNR+NDVDTS LEYFW+CCGE      GC  G H SYD+
Sbjct:   48 CRLCKGQYDPGQNTGRSCRRHSGYYSGRLNRVNDVDTSDLEYFWNCCGEESKHAHGCEWGHHVSYDE 114          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Uncharacterized (protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IN21_KLENI)

HSP 1 Score: 68.9 bits (167), Expect = 8.190e-13
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 0
Query:   14 ATAATGGDVVRTSTATSTCRNCKQQFNPDDNVDGSCSYHPGLFSGRLNR----------INDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDD 98
            ATA  GG   R +  T  C+ CKQQ++P+ N   +C YH   + G   R          +   D   +  +W CCG  DP+ PGC    H SYD+
Sbjct:   15 ATAQAGGQTNRANLRT--CKQCKQQYDPESNHPRACKYHTAHYGGETRRKFESVYEGGTLTTADGGKITAYWHCCGNQDPTDPGCEAAPHRSYDE 107          
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Match: Cysteine (and histidine rich domain containing 1 n=2 Tax=Lepisosteidae TaxID=7915 RepID=W5MK59_LEPOC)

HSP 1 Score: 50.4 bits (119), Expect = 8.370e-5
Identity = 31/77 (40.26%), Postives = 38/77 (49.35%), Query Frame = 0
Query:   33 RNCKQQFNPDDNVDGSCSYHPGL--FSGRLNRINDVDTSGLEYFWSCCGE--TDPSH----PGCVKGKHASYDDPPE 101
            + C Q+FNP+DN D  C+YHPG+  F   L              WSCC    TD S     PGC KG H + + PPE
Sbjct:    9 KGCGQRFNPEDNPDDGCTYHPGVPVFHDALKG------------WSCCKRRTTDFSDFLSIPGCTKGPH-NKEKPPE 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10223.249.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Uncharacterized1.790e-8099.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.410e-7390.68protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.030e-2859.04protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]
Uncharacterized2.180e-2754.65protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169... [more]
Uncharacterized7.840e-2661.19protein n=1 Tax=Porphyra umbilicalis TaxID=2786 Re... [more]
Uncharacterized4.650e-2351.22protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
Hypothetical1.590e-2258.21protein n=1 Tax=Compsopogon caeruleus TaxID=31354 ... [more]
Uncharacterized8.190e-1334.74protein n=1 Tax=Klebsormidium nitens TaxID=105231 ... [more]
Cysteine8.370e-540.26and histidine rich domain containing 1 n=2 Tax=Lep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35106FAMILY NOT NAMEDcoord: 24..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10223contigEcto-sp9_F_contig10223:3617..4530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10223.249.1mRNA_Ecto-sp9_F_contig10223.249.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10223 3340..4530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10223.249.1 ID=prot_Ecto-sp9_F_contig10223.249.1|Name=mRNA_Ecto-sp9_F_contig10223.249.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=117bp
GQVVVSTKSGDGEATAATGGDVVRTSTATSTCRNCKQQFNPDDNVDGSCS
YHPGLFSGRLNRINDVDTSGLEYFWSCCGETDPSHPGCVKGKHASYDDPP
EGGDGAWRSPLTGTLR*
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