prot_Ecto-sp9_F_contig10220.245.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10220.245.1
Unique Nameprot_Ecto-sp9_F_contig10220.245.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=2 Tax=PX clade TaxID=569578 RepID=A0A6H5KDJ3_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 2.830e-76
Identity = 121/123 (98.37%), Postives = 123/123 (100.00%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 123
            +ETEDL+ADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT
Sbjct:  123 RETEDLLADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 245          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER7_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.170e-74
Identity = 117/123 (95.12%), Postives = 121/123 (98.37%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 123
            +ETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPL+AGTVNR SDVLGAGVVANDWTAFCGLDTTSTE SV++SIFKLNEQGPSNIVNSMRSSLIDSLT
Sbjct:    2 RETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLMAGTVNRRSDVLGAGVVANDWTAFCGLDTTSTENSVLKSIFKLNEQGPSNIVNSMRSSLIDSLT 124          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8K6_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.680e-64
Identity = 100/122 (81.97%), Postives = 115/122 (94.26%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE+++ADVLGVEVFRQTIAGNALVGSY+ ITNQGGMVHP+T++ED+EELSSLLQIPLVAGTVNRGSDVLGAG+VANDW AFCGLDTTSTEISVVESIFKL +  P N+V ++R+SLIDSL
Sbjct:  123 RETEEILADVLGVEVFRQTIAGNALVGSYSYITNQGGMVHPKTTVEDLEELSSLLQIPLVAGTVNRGSDVLGAGLVANDWAAFCGLDTTSTEISVVESIFKLQDNMPVNVVKTLRTSLIDSL 244          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBL7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.710e-63
Identity = 101/122 (82.79%), Postives = 115/122 (94.26%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE++VADVLGVEVFRQTIAGNALVGSY+ ITNQGGMVHP+T++ED+EELSSLLQIPLVAGTVNRGSDVLGAG+VANDW AFCGLDTTSTEISVVESIFKL +  P N+V ++R+SLIDSL
Sbjct:  195 RETEEIVADVLGVEVFRQTIAGNALVGSYSYITNQGGMVHPKTTVEDLEELSSLLQIPLVAGTVNRGSDVLGAGLVANDWAAFCGLDTTSTEISVVESIFKLQDNMPVNVVKTLRTSLIDSL 316          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=9 Tax=Chlamydomonadales TaxID=3042 RepID=A8HUE0_CHLRE)

HSP 1 Score: 201 bits (510), Expect = 6.560e-63
Identity = 94/122 (77.05%), Postives = 114/122 (93.44%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE++VADVLGVEVFRQT+AGN LVGSYA +TNQGG+VHP+TSIED++ELSSLLQIPLVAGT+NRGSDV+GAG+VANDW AFCGLDTTSTE+SV+ES+FKL +  P NIVN +R+SLID++
Sbjct:  123 RETEEIVADVLGVEVFRQTVAGNVLVGSYAALTNQGGLVHPKTSIEDLDELSSLLQIPLVAGTINRGSDVIGAGLVANDWAAFCGLDTTSTELSVIESVFKLRDAQPMNIVNDLRASLIDTM 244          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9W4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.250e-62
Identity = 98/123 (79.67%), Postives = 116/123 (94.31%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 123
            +ETED+VADVLGVEVFRQT+AGNALVGSY  I+NQGG+VHPRTS+ED+EELS+LLQ+PLVAGTVNRGSDVLGAG+V NDW+AFCGLDTTSTEISV+E+IF+LNE GP+ IV+ +RSSL+D LT
Sbjct:  204 RETEDIVADVLGVEVFRQTVAGNALVGSYCRISNQGGIVHPRTSVEDMEELSALLQVPLVAGTVNRGSDVLGAGMVVNDWSAFCGLDTTSTEISVMEAIFRLNEAGPAAIVSDLRSSLMDQLT 326          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R476_SELML)

HSP 1 Score: 199 bits (505), Expect = 3.760e-62
Identity = 96/122 (78.69%), Postives = 112/122 (91.80%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE+LVADVLGVEVFRQTIAGN LVGSY V +N+GG+VHP TSIED++ELSSLLQ+PLVAGTVNRGSDV+GAG++ NDWTAFCGLDTT+TE+SVVES+FKL E  PS IVN MR+SLID+L
Sbjct:  123 KETEELVADVLGVEVFRQTIAGNVLVGSYGVFSNRGGLVHPHTSIEDLDELSSLLQVPLVAGTVNRGSDVIGAGLIVNDWTAFCGLDTTTTELSVVESVFKLRESQPSAIVNEMRASLIDTL 244          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KGW7_CHABU)

HSP 1 Score: 197 bits (501), Expect = 6.380e-62
Identity = 95/122 (77.87%), Postives = 114/122 (93.44%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE+L+ADVLGVEVFRQTIAGN LVGSY V +N+GG+VHPRTSIED++ELSSLLQ+PLVAGTVNRGS+V+GAG+VANDWTAFCGLDTT+TE+SVVES+FKL +  PS IV+ MR+SLIDS+
Sbjct:   95 RETEELIADVLGVEVFRQTIAGNILVGSYCVFSNKGGLVHPRTSIEDLDELSSLLQVPLVAGTVNRGSEVIGAGMVANDWTAFCGLDTTATELSVVESVFKLRDAHPSAIVHEMRASLIDSM 216          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=6 Tax=Streptophyta TaxID=35493 RepID=A9TFW5_PHYPA)

HSP 1 Score: 197 bits (501), Expect = 1.520e-61
Identity = 94/123 (76.42%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSLT 123
            +ETE+LVADVLGVEVFRQTIAGN LVGSY   TN+GG+VHP TSIED++ELSSLLQ+PLVAGTVNRGS+V+GAG+V NDWTAFCGLDTT+TE+SV+ES+FKL +  PSNIVN MR+SLID+++
Sbjct:  123 RETEELVADVLGVEVFRQTIAGNILVGSYCQFTNRGGLVHPHTSIEDLDELSSLLQVPLVAGTVNRGSEVIGAGLVVNDWTAFCGLDTTATELSVIESVFKLRDAQPSNIVNEMRASLIDTMS 245          
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Match: Eukaryotic (translation initiation factor 6 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y268_9CHLO)

HSP 1 Score: 196 bits (497), Expect = 6.150e-61
Identity = 93/122 (76.23%), Postives = 112/122 (91.80%), Query Frame = 0
Query:    1 QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEELSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIFKLNEQGPSNIVNSMRSSLIDSL 122
            +ETE+++ADVLGVEVFRQ+IA N LVGSY   TNQGG+VHP+TSIED++ELSSLLQ+PLVAGTVNRGSDV+GAG+VANDW+AFCGLDTTSTE+SV+ES+FKL +  PSNIV  MR+SLIDS+
Sbjct:  123 KETEEIIADVLGVEVFRQSIANNVLVGSYCNFTNQGGLVHPQTSIEDLDELSSLLQVPLVAGTVNRGSDVIGAGLVANDWSAFCGLDTTSTELSVIESVFKLRDSQPSNIVKEMRASLIDSM 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10220.245.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Eukaryotic2.830e-7698.37translation initiation factor 6 n=2 Tax=PX clade T... [more]
Eukaryotic1.170e-7495.12translation initiation factor 6 n=1 Tax=Ectocarpus... [more]
Eukaryotic5.680e-6481.97translation initiation factor 6 n=1 Tax=Nannochlor... [more]
Eukaryotic1.710e-6382.79translation initiation factor 6 n=1 Tax=Nannochlor... [more]
Eukaryotic6.560e-6377.05translation initiation factor 6 n=9 Tax=Chlamydomo... [more]
Eukaryotic1.250e-6279.67translation initiation factor 6 n=1 Tax=Rhizochrom... [more]
Eukaryotic3.760e-6278.69translation initiation factor 6 n=2 Tax=Selaginell... [more]
Eukaryotic6.380e-6277.87translation initiation factor 6 n=1 Tax=Chara brau... [more]
Eukaryotic1.520e-6176.42translation initiation factor 6 n=6 Tax=Streptophy... [more]
Eukaryotic6.150e-6176.23translation initiation factor 6 n=1 Tax=Trebouxia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002769Translation initiation factor IF6SMARTSM00654eIF6neu2coord: 1..82
e-value: 4.9E-6
score: 10.8
IPR002769Translation initiation factor IF6PFAMPF01912eIF-6coord: 2..81
e-value: 9.6E-32
score: 110.0
IPR002769Translation initiation factor IF6PANTHERPTHR10784EUKARYOTIC TRANSLATION INITIATION FACTOR 6coord: 1..121
IPR002769Translation initiation factor IF6HAMAPMF_00032eIF_6coord: 1..123
score: 68.64
NoneNo IPR availableGENE3D3.75.10.10coord: 1..103
e-value: 3.4E-47
score: 162.4
NoneNo IPR availablePANTHERPTHR10784:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 6-1-RELATEDcoord: 1..121
NoneNo IPR availableSUPERFAMILY55909Penteincoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10220contigEcto-sp9_F_contig10220:3439..4323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10220.245.1mRNA_Ecto-sp9_F_contig10220.245.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10220 3439..4323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10220.245.1 ID=prot_Ecto-sp9_F_contig10220.245.1|Name=mRNA_Ecto-sp9_F_contig10220.245.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
QETEDLVADVLGVEVFRQTIAGNALVGSYAVITNQGGMVHPRTSIEDIEE
LSSLLQIPLVAGTVNRGSDVLGAGVVANDWTAFCGLDTTSTEISVVESIF
KLNEQGPSNIVNSMRSSLIDSLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002769eIF6