prot_Ecto-sp9_F_contig10213.241.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10213.241.1
Unique Nameprot_Ecto-sp9_F_contig10213.241.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length220
Homology
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Similar (to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 8.540e-120
Identity = 206/240 (85.83%), Postives = 207/240 (86.25%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXX----------------------VGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            MKNFLSLFPARPVRGLRE+PNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYA G                            VGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCM VNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGG   GVPGPVHLNFMFRENLAPVEGAVR
Sbjct:  854 MKNFLSLFPARPVRGLREMPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAVGFARAGPGRGXXXXXXXXXXXXXXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCM-VNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGXXXGVPGPVHLNFMFRENLAPVEGAVR 1092          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV35_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 4.560e-118
Identity = 200/240 (83.33%), Postives = 203/240 (84.58%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXX----------------------VGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            MKNFLSLFPARP RGLRE+PNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYA G                               GALG+CAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCM VNLLGSRARLS+DVQCPTDEVSAACLLSDIDHAVSRALGGGG   VPGPVHLNFMFRENLAPVEGAVR
Sbjct:  621 MKNFLSLFPARPARGLREMPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAVGFARAGPGRGGRAHSXXXXXXXXXXXXXXXXXGALGICAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMCVNLLGSRARLSMDVQCPTDEVSAACLLSDIDHAVSRALGGGG---VPGPVHLNFMFRENLAPVEGAVR 857          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: MR_MLE (domain-containing protein n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2W1_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.610e-58
Identity = 123/220 (55.91%), Postives = 143/220 (65.00%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVRYT 220
            M NF+ +FP RP   LR +PN+ +LW  LVVEEL R GV HF + PGSRS PL  A ARHP    + HHDERGAGFY  G        +      AV+ +SGTAVANLLPAA EA    + +LLLTADRPPE R CG+NQT+ Q    MF++     AR + DV CPT EV A+ LLSD+D+AVS A     RG  PGPVHLNFM RENLAP  GAVR T
Sbjct:  520 MANFVRMFP-RPSPPLRSLPNLATLWATLVVEELARNGVTHFVIAPGSRSTPLVTAAARHPDTTLMVHHDERGAGFYCLGYARARGRPA------AVIVTSGTAVANLLPAAVEAATDRVPLLLLTADRPPEQRDCGANQTVAQPD--MFLHF----ARWTKDVPCPTPEVLASSLLSDVDYAVSMA-----RGADPGPVHLNFMLRENLAPEGGAVRDT 721          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: ADC (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z971_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.340e-57
Identity = 129/235 (54.89%), Postives = 146/235 (62.13%), Query Frame = 0
Query:    1 MKNFLSLF-----PARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIA-RHPSA------VSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVP-----GPVHLNFMFRENLAPVEGAVR 218
            MK  LSLF     PA     LR +PNVN+L GAL  EEL R GVR   +CPGSRS PL  A A R PSA      + + HHDERGA F+A G       GSG    CAVVT+SGTAVANLLP A EA   G +MLLLTADRPPE R  G++QT+DQ   C++V+LL + AR   DV  P D VSA  LLSD+ HAVSRA G             GPVHLN MFRENLAP  GA+R
Sbjct:  181 MKGMLSLFARAPAPAASAAALRRLPNVNALAGALAAEELARCGVRACVLCPGSRSTPLTHAAAPRAPSAAXXXXAMPLVHHDERGAAFFALGYAK----GSGGR-PCAVVTTSGTAVANLLPGAMEAGLGGHAMLLLTADRPPEARDVGADQTLDQV--CLYVHLLRNCARWFRDVAPPDDAVSACALLSDVSHAVSRASGSSXXXXXXXXXDAGPVHLNLMFRENLAPEGGAIR 408          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7F3_GUITC)

HSP 1 Score: 195 bits (495), Expect = 1.610e-55
Identity = 117/218 (53.67%), Postives = 135/218 (61.93%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            M+N L LF A P R L  +PN+N LW  L VEEL R GV  FC+CPGSRS PLAVA++ +  A S+  HDER AGFY  G        +      A + +SGTAVANLLPAA EA   GL MLLLTADRP ELR  GSNQTI+QA       + G   R S D+ CP+D++ A  LLSD+D AV RA          GPVHLNF FRENLAP  G VR
Sbjct:    1 MRNILQLF-ANPPRPLSSLPNINMLWAVLTVEELCRCGVTVFCLCPGSRSTPLAVAVSWNAKATSVVMHDERSAGFYCVGYARAKRKPA------ACIVTSGTAVANLLPAAVEASQQGLPMLLLTADRPFELRDNGSNQTIEQA------GIFGRYVRWSRDLCCPSDQIPANVLLSDVDFAVHRASSS-----PRGPVHLNFQFRENLAPDGGPVR 200          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Isochorismate (synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H9L0_9CRYP)

HSP 1 Score: 198 bits (503), Expect = 8.830e-55
Identity = 117/218 (53.67%), Postives = 137/218 (62.84%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            M+N L LF A P R L  +PN+N LW  L VEEL R GV  FC+CPGSRS PLAVA++ +P A ++  HDER AGFY  G        +      A + +SGTAVANLLPAA EA   GL MLLLTADRP ELR  GSNQTI+QA       + G   R S D+ CP+D++ A  LLSD+D+AV RA          GPVHLNF FRENLAP  G VR
Sbjct:  553 MRNILQLF-ANPPRPLSSLPNINMLWAVLTVEELCRCGVTVFCLCPGSRSTPLAVAVSWNPKATAVVMHDERSAGFYCVGYARASKKPA------ACLVTSGTAVANLLPAAVEASQQGLPMLLLTADRPFELRDNGSNQTIEQA------GIFGRYVRWSRDICCPSDQIPANVLLSDVDYAVHRASSS-----PRGPVHLNFQFRENLAPDGGPVR 752          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PIL3_9DINO)

HSP 1 Score: 191 bits (486), Expect = 1.560e-52
Identity = 111/225 (49.33%), Postives = 136/225 (60.44%), Query Frame = 0
Query:    1 MKNFLSLFPARP-------VRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            M+ F   FP  P       +  L  +PN+N+LW  LVVEE VRLGV+ F +C GSRS PL VA+ARHP A ++  HDERG  F+A G               A++ +SGTAVANLLP   EA  + + +LLLTADRP ELR  G+NQTI Q        + G+  R + D+ CPT EV A  LLSD+D AV+ A G       PGPVHLNF FRENLAP +GAVR
Sbjct:  502 MRQFTEAFPEAPSVPRGLDIATLAALPNINTLWATLVVEECVRLGVKSFVICAGSRSTPLVVAVARHPHASAVVDHDERGGAFFALGWAKATRA------PVAIIVTSGTAVANLLPGVVEAAQSHVPLLLLTADRPSELRDTGANQTITQP------GIFGAHVRWAKDMPCPTTEVPAHALLSDVDLAVAHASGA--LADHPGPVHLNFAFRENLAPDKGAVR 712          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FDF8_NOCSC)

HSP 1 Score: 188 bits (478), Expect = 1.980e-51
Identity = 116/222 (52.25%), Postives = 135/222 (60.81%), Query Frame = 0
Query:    1 MKNFLSLFPARPVRGLRE----IPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            M+ F   FPA P  GL       PN+N+LW  LVVEELVR GV HF +C GSRS PL VA+AR P+A  + +HDERGA FYA G      VG    G   V+ +SG+AVANLLP   EA AA + ++LLTADRPPELR  G+NQTI Q       N+ G   R   D   P+ E  A  LLSD+D AV  A G   +   PGPVHLNF FRENLAP  G VR
Sbjct:  532 MRQFTEGFPAEPPGGLAASLSAAPNLNTLWATLVVEELVRSGVLHFVICAGSRSTPLVVAVARSPAATFVMNHDERGAAFYALGWAKA--VG----GPVGVIVTSGSAVANLLPGCLEAAAAQVPLVLLTADRPPELRDTGANQTITQP------NIFGRFVRWEKDFPPPSTEYPAHALLSDVDLAVGHATGSLSQN--PGPVHLNFCFRENLAPDAGPVR 739          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R202_9DINO)

HSP 1 Score: 186 bits (473), Expect = 9.780e-51
Identity = 111/210 (52.86%), Postives = 132/210 (62.86%), Query Frame = 0
Query:    9 PARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            PA  ++ LRE+PN+N+LW  LV EE VR GVR+F +CPGSRS PL VA+ARHP A S  +HDER A FYA G               AV+ +SGTAVANLLP   EA  A + +LLLTADRP ELR  G+NQTI Q        + G   R + D +CP+ +  A  LLSD+D AV+ A GG      PGPVHLNF FRENLAP  G VR
Sbjct:  602 PAAHLQHLREMPNLNTLWAHLVTEECVRSGVRNFVICPGSRSTPLVVAVARHPHAHSAINHDERAAAFYALGWAKAVEA------PVAVIVTSGTAVANLLPGVVEAAQAQVPLLLLTADRPSELRDTGANQTITQP------GIFGVYTRWAKDFECPSVQFPAHALLSDVDLAVAAA-GGQLSSRHPGPVHLNFCFRENLAPDAGPVR 798          
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IHZ5_9EUGL)

HSP 1 Score: 169 bits (427), Expect = 8.380e-49
Identity = 106/213 (49.77%), Postives = 130/213 (61.03%), Query Frame = 0
Query:    6 SLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRSAPLAVAIARHPSAVSISHHDERGAGFYAAGXXXXXXVGSGALGMCAVVTSSGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMFVNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPVHLNFMFRENLAPVEGAVR 218
            SL    P+R L E P +N+LW A+VVEELVRLGV HF +CPGSRS PL VA+ARHP+   +  +DERGA +YA G       G  A   C +VTS GTAVANLLP   EA  + + +L+L+ADRP +LRG  +NQTI Q    +F   +        D   PT E     LL+DID AV + +GG  + G   PVHLNF  RENLAP  G VR
Sbjct:   11 SLAAPGPMR-LGEAPTINALWSAVVVEELVRLGVTHFVICPGSRSTPLVVAVARHPATTFVVCNDERGAAYYAVGYGRATNGGK-ASAACLIVTS-GTAVANLLPGIVEAHRSSVPLLVLSADRPADLRGVDANQTIAQP--AIFQQFVAWEK----DFPAPTVEYPLEALLADIDFAVLK-MGGLDQSGYGQPVHLNFQLRENLAPEAGPVR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10213.241.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Similar8.540e-12085.83to Isochorismate Synthase n=1 Tax=Ectocarpus silic... [more]
Uncharacterized4.560e-11883.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
MR_MLE1.610e-5855.91domain-containing protein n=6 Tax=Monodopsidaceae ... [more]
ADC2.340e-5754.89synthase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
Uncharacterized1.610e-5553.67protein n=1 Tax=Guillardia theta (strain CCMP2712)... [more]
Isochorismate8.830e-5553.67synthase (Fragment) n=1 Tax=Hanusia phi TaxID=3032... [more]
Hypothetical1.560e-5249.33protein (Fragment) n=1 Tax=Brandtodinium nutricula... [more]
Hypothetical1.980e-5152.25protein (Fragment) n=1 Tax=Noctiluca scintillans T... [more]
Hypothetical9.780e-5152.86protein n=1 Tax=Alexandrium monilatum TaxID=311494... [more]
Hypothetical8.380e-4949.77protein (Fragment) n=1 Tax=Eutreptiella gymnastica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 18..219
e-value: 4.3E-52
score: 178.3
IPR012001Thiamine pyrophosphate enzyme, N-terminal TPP-binding domainPFAMPF02776TPP_enzyme_Ncoord: 27..204
e-value: 3.9E-21
score: 75.4
IPR0044332-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthasePANTHERPTHR42916FAMILY NOT NAMEDcoord: 16..214
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 20..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10213contigEcto-sp9_F_contig10213:537..2362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10213.241.1mRNA_Ecto-sp9_F_contig10213.241.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10213 537..2365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10213.241.1 ID=prot_Ecto-sp9_F_contig10213.241.1|Name=mRNA_Ecto-sp9_F_contig10213.241.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=220bp
MKNFLSLFPARPVRGLREIPNVNSLWGALVVEELVRLGVRHFCVCPGSRS
APLAVAIARHPSAVSISHHDERGAGFYAAGGGGGGGVGSGALGMCAVVTS
SGTAVANLLPAAAEADAAGLSMLLLTADRPPELRGCGSNQTIDQARCCMF
VNLLGSRARLSLDVQCPTDEVSAACLLSDIDHAVSRALGGGGRGGVPGPV
HLNFMFRENLAPVEGAVRYT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012001Thiamin_PyroP_enz_TPP-bd_dom
IPR004433MenaQ_synth_MenD
IPR029061THDP-binding