prot_Ecto-sp9_F_contig10209.235.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10209.235.1
Unique Nameprot_Ecto-sp9_F_contig10209.235.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length275
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10209.235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC13_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 1.170e-122
Identity = 233/297 (78.45%), Postives = 245/297 (82.49%), Query Frame = 0 
Query:    1 MANLVPTLSYVPFEVARTCEQTPGTREARAKCDQLTTAIANAVNNAPEEDVLLFVKSHMNDLLEFLTREREVARGMAKAVLDKAPSARAAARWLAIMHTSRELMWVARTLVEYRRAMTFAERDVEEAVHWLEARAAPLPCACVLLGTLEDGDNEGEAYVPPEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------GVQGQEATPTEGGKEAVGQAATPAVPNSQTTEKVQEVAGCGGGSSQQGSGAAPRGHLSFLTNTAGVASAARPAKRPKRQCN 274
            MANLVPTLSYV FEVARTCE+TPGTR ARAKC+QLT AIA+AVNN  E +VLLFVKS +NDL E L REREVARGM K V+DKAPSA AAARWL IMHTSRELMWVARTLVEYRRAMTF  RDVEEAVHWLEARA+PLP ACVLLGTLED DNEGEAYVPP+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXX                       G+QGQ ATP EGGK+AVGQAA PAVPN QTTEKVQEVAGC GGSSQ GSGAAPRGHLS LTN AG ASAARPAKRPKRQC+
Sbjct:    1 MANLVPTLSYVSFEVARTCEETPGTRAARAKCEQLTAAIADAVNNVAEAEVLLFVKS-LNDLPELLAREREVARGMVKTVMDKAPSAGAAARWLIIMHTSRELMWVARTLVEYRRAMTFESRDVEEAVHWLEARASPLPRACVLLGTLEDDDNEGEAYVPPKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLQGQGATPAEGGKKAVGQAAAPAVPNPQTTEKVQEVAGCEGGSSQ-GSGAAPRGHLSSLTNAAGAASAARPAKRPKRQCD 295
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10209.235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD96_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 2.910e-73
Identity = 155/181 (85.64%), Postives = 160/181 (88.40%), Query Frame = 0 
Query:   59 MNDLLEFLTREREVARGMAKAVLDKAPSARAAARWLAIMHTSRELMWVARTLVEYRRAMTFAERDVEEAVHWLEARAAPLPCACVLLGTLEDGDNEGEAYVPPEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQGQEATPTEGGKEAVGQAATPAVPNSQTTEKVQEVAGCGGGSSQ 239
            MNDL EFLTREREVARGMAKAVLDKAPSA AAARWL IMHTSRELMWVA TLVEYRRAMTF  RDVEEAVHWLEARA PLP A VLLGTLED DN GEAYVPP+ + XXXXXXXXXXXXXXXXXXXXXXXXXXX G+ GQ ATP EGGK+ VGQAA PAVPN QTTEKVQE AGCGGG+SQ
Sbjct:    1 MNDLQEFLTREREVARGMAKAVLDKAPSAGAAARWLTIMHTSRELMWVAGTLVEYRRAMTFESRDVEEAVHWLEARATPLPLARVLLGTLEDDDNAGEAYVPPDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLHGQAATPAEGGKKVVGQAAAPAVPNPQTTEKVQEDAGCGGGTSQ 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10209.235.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.170e-12278.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.910e-7385.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 163..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10209contigEcto-sp9_F_contig10209:65..1723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10209.235.1mRNA_Ecto-sp9_F_contig10209.235.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10209 65..1723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10209.235.1 ID=prot_Ecto-sp9_F_contig10209.235.1|Name=mRNA_Ecto-sp9_F_contig10209.235.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=275bp
MANLVPTLSYVPFEVARTCEQTPGTREARAKCDQLTTAIANAVNNAPEED
VLLFVKSHMNDLLEFLTREREVARGMAKAVLDKAPSARAAARWLAIMHTS
RELMWVARTLVEYRRAMTFAERDVEEAVHWLEARAAPLPCACVLLGTLED
GDNEGEAYVPPEGEEEEEEEEEEGEEQEDEEEEQEEEEQEEEEGVQGQEA
TPTEGGKEAVGQAATPAVPNSQTTEKVQEVAGCGGGSSQQGSGAAPRGHL
SFLTNTAGVASAARPAKRPKRQCN*
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